ZFIN Sequences for Gene: ctnna2

ZFIN ID: ZDB-GENE-060815-3

ZFIN ID: ZDB-GENE-060815-3

SEQUENCE INFORMATION

Gene Name:	catenin (cadherin-associated protein), alpha 2
Gene Symbol:	ctnna2

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001159372 (1)	2598 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005160072 (1)	3569 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073948054 (1)	3376 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073948055 (1)	2669 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073948056 (1)	1819 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073948057 (1)	1568 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01007559 (1)	3622 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC131855 (1)	3426 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC153431 (1)	1349 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC115077 (1)	1307 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC142789 (1)	1268 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC083194 (1)	1262 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC096942 (1)	1243 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BM101783 (1)	666 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:AL929516 (2)	165892 nt	Select Tool MegaBLAST Ensembl
	GenBank:AL626804 (2)	149717 nt	Select Tool MegaBLAST Ensembl
	GenBank:CT998561 (2)	143274 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU076051 (2)	123947 nt	Select Tool MegaBLAST Ensembl
	GenBank:CT997814 (2)	110993 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX927206 (2)	108361 nt	Select Tool MegaBLAST Ensembl
	GenBank:CR925858 (2)	101649 nt	Select Tool MegaBLAST Ensembl
	GenBank:CR391918 (2)	25917 nt	Select Tool MegaBLAST Ensembl
	GenBank:FP340494 (2)	7623 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:DU644716 (1)	380 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:JBMGRA010000001 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:A0A8M2B6X9 (1)	905 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58JCG0 (1)	892 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:B7ZC77 (3)	865 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58JCF7 (1)	589 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58JCF1 (1)	380 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58JCE8 (1)	373 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001152844 (1)	865 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005160129 (1)	905 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073804155 (1)	892 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073804156 (1)	589 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073804157 (1)	380 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073804158 (1)	373 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:B7ZC77 (1)	865 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAH83194 (1)	359 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAH96942 (1)	359 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI15078 (1)	359 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI42790 (1)	359 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI53432 (1)	359 aa	Select Tool ZFIN BLAST NCBI BLAST

ctnna2 CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH211-10C20 (1)	Genomic	GenBank:AL929516	165892	Select Tool MegaBLAST Ensembl
[BAC] CH211-71K14 (1)	Genomic	GenBank:BX927206	108361	Select Tool MegaBLAST Ensembl
[BAC] CH211-87B14 (1)	Genomic	GenBank:CU076051	123947	Select Tool MegaBLAST Ensembl
[BAC] CH211-243L5 (1)	Genomic	GenBank:CR391918	25917	Select Tool MegaBLAST Ensembl
[BAC] DKEY-230I19 (1)	Genomic	GenBank:CT997814	110993	Select Tool MegaBLAST Ensembl
[BAC] DKEYP-13B9 (1)	Genomic	GenBank:CT998561	143274	Select Tool MegaBLAST Ensembl
[BAC] DKEYP-50E3 (1)	Genomic	GenBank:CR925858	101649	Select Tool MegaBLAST Ensembl
[BAC] RP71-1H10 (1)	Genomic	GenBank:AL626804	149717	Select Tool MegaBLAST Ensembl
[FOSMID] CH1073-15I3 (1)	Genomic	GenBank:FP340494	7623	Select Tool ZFIN BLAST NCBI BLAST Ensembl

ctnna2 ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[EST] eu764 (1)	Genomic	GenBank:DU644716	380	Select Tool ZFIN BLAST NCBI BLAST Ensembl
[EST] IMAGE:5410539 (1)	RNA	GenBank:BM101783	666	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT