ZFIN Sequences for Gene: vps8

ZFIN ID: ZDB-GENE-060503-348

ZFIN ID: ZDB-GENE-060503-348

SEQUENCE INFORMATION

Gene Name:	VPS8 subunit of CORVET complex
Gene Symbol:	vps8

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001080616 (1)	4395 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073949180 (1)	4399 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073949179 (1)	2670 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01043128 (1)	4437 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC129389 (1)	1540 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EG578785 (1)	917 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CO813154 (1)	804 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BQ480769 (1)	696 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AW233610 (1)	626 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AL913587 (1)	539 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CK695913 (1)	487 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CK700183 (1)	484 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EB969042 (1)	387 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX088533 (1)	265699 nt	Blast at MegaBLAST
	GenBank:CT841955 (1)	201632 nt	Blast at MegaBLAST
	GenBank:BX255890 (2)	175490 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU468285 (2)	64181 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX005120 (2)	29329 nt	Select Tool MegaBLAST Ensembl
	GenBank:JBMGRA010000001 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:A0A8M3AQ47 (1)	1414 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58JFM2 (1)	1412 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:F1QQ05 (1)	1412 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58JFM0 (1)	805 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001074085 (1)	1412 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073805281 (1)	1412 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073805280 (1)	805 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAI29390 (1)	455 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAK10810 (1)	259 aa	Select Tool ZFIN BLAST NCBI BLAST

vps8 CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH73-115F13 (1)	Genomic	GenBank:CU468285	64181	Select Tool MegaBLAST Ensembl
[BAC] CH211-168J2 (1)	Genomic	GenBank:BX005120	29329	Select Tool MegaBLAST Ensembl
[BAC] CH211-236L15 (2)	Genomic	GenBank:BX255890	175490	Select Tool MegaBLAST Ensembl
[BAC] DKEY-24B15 (1)	Genomic	GenBank:BX088533	265699	Blast at MegaBLAST

vps8 ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[CDNA] MGC:158695 (1)	RNA	GenBank:BC129389	1540	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] IMAGE:7166005 (1)	RNA	GenBank:CK700183	484	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT