ZFIN Sequences for Gene: vti1a

ZFIN ID: ZDB-GENE-050809-135

ZFIN ID: ZDB-GENE-050809-135

SEQUENCE INFORMATION

Gene Name:	vesicle transport through interaction with t-SNAREs 1A
Gene Symbol:	vti1a

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001313750 (1)	3629 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_001034980 (1)	1360 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_009306788 (1)	3663 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005156335 (1)	3652 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_017358471 (1)	3642 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XR_002457347 (1)	3147 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XR_002457346 (1)	3136 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01043209 (1)	3760 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC099994 (1)	1360 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	RefSeq:NW_018394852 (1)	265246 nt	Blast at MegaBLAST
	GenBank:CR456684 (1)	262809 nt	Blast at MegaBLAST
	GenBank:AL935160 (1)	140401 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU459185 (1)	132093 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU459116 (2)	38558 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU459010 (2)	15282 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
Polypeptide	UniProtKB:A0A2R8Q5I2 (1)	224 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:F1Q7S0 (1)	217 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M3BE99 (1)	194 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M6Z1C2 (1)	187 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001300679 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005156392 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009305063 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_017213960 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAH99994 (1)	191 aa	Select Tool ZFIN BLAST NCBI BLAST

vti1a CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH73-78C21 (1)	Genomic	GenBank:CU459010	15282	Select Tool ZFIN BLAST NCBI BLAST Ensembl
[BAC] CH73-167A11 (1)	Genomic	GenBank:CU459185	132093	Select Tool MegaBLAST Ensembl
[BAC] DKEY-46I8 (1)	Genomic	GenBank:CR456684	262809	Blast at MegaBLAST
[FOSMID] CH1073-103H6 (1)	Genomic	GenBank:CU459116	38558	Select Tool MegaBLAST Ensembl

vti1a ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[CDNA] MGC:109895 (1)	RNA	GenBank:BC099994	1360	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Polypeptide	GenPept:AAH99994	191	Select Tool ZFIN BLAST NCBI BLAST