ZFIN Sequences for Gene: col5a1

ZFIN ID: ZDB-GENE-041105-6

ZFIN ID: ZDB-GENE-041105-6

SEQUENCE INFORMATION

Gene Name:	procollagen, type V, alpha 1
Gene Symbol:	col5a1

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:XM_021468998 (1)	9644 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_021468999 (1)	9644 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01006841 (1)	9886 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GQ485667 (1)	6487 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CT612432 (1)	859 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CT732598 (1)	846 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CK025493 (1)	797 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AL724192 (1)	782 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CO921092 (1)	779 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CT666443 (1)	772 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:DN895755 (1)	750 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CT631660 (1)	737 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AL730713 (1)	717 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EE694028 (1)	594 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CK693362 (1)	593 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CK026665 (1)	507 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI942877 (1)	405 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CK738791 (1)	331 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:FP102894 (2)	92532 nt	Select Tool MegaBLAST Ensembl
	GenBank:FP102966 (2)	64861 nt	Select Tool MegaBLAST Ensembl
	GenBank:FP236595 (2)	33863 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU459135 (2)	11949 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
Polypeptide	UniProtKB:A0A8M9PD17 (1)	2024 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PIP9 (1)	2024 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:XP_021324673 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021324674 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:ADG36303 (1)	2010 aa	Select Tool ZFIN BLAST NCBI BLAST

col5a1 CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH73-165E7 (1)	Genomic	GenBank:FP102966	64861	Select Tool MegaBLAST Ensembl
[BAC] CH73-331J9 (1)	Genomic	GenBank:FP102894	92532	Select Tool MegaBLAST Ensembl
[BAC] DKEY-87M23 (1)	Genomic	GenBank:CU459135	11949	Select Tool ZFIN BLAST NCBI BLAST Ensembl
[FOSMID] CH1073-153C9 (1)	Genomic	GenBank:FP236595	33863	Select Tool MegaBLAST Ensembl