ZFIN Sequences for Gene: cacna1aa

ZFIN ID: ZDB-GENE-040724-26

ZFIN ID: ZDB-GENE-040724-26

SEQUENCE INFORMATION

Gene Name:	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a
Gene Symbol:	cacna1aa

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:XM_005164090 (1)	6731 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_009299585 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_009299590 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_009299591 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_009299593 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_017354794 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474372 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474375 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474379 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474381 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474386 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474390 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474393 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474394 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474398 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474403 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474404 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474408 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474412 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474420 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474422 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474423 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474428 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474432 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474433 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474440 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474441 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021474442 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	GenBank:AL914899 (1)	535 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AW233744 (1)	354 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01002814 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
Genomic	GenBank:BX548009 (1)	128639 nt	Select Tool MegaBLAST Ensembl
	GenBank:LO018483 (1)	118605 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX908773 (1)	51065 nt	Select Tool MegaBLAST Ensembl
	GenBank:DX503759 (1)	400 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
Polypeptide	UniProtKB:A0A8M9PFQ8 (1)	2371 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9Q9N8 (1)	2371 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PYS3 (1)	2370 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9Q509 (1)	2370 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9Q515 (1)	2370 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PSR1 (1)	2368 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9Q9Q4 (1)	2368 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PSR6 (1)	2367 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PYT6 (1)	2367 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PSS2 (1)	2366 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PYU4 (1)	2363 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PFU0 (1)	2362 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PSS9 (1)	2362 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M3B8D7 (1)	2357 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M6Z5Q8 (1)	2356 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9Q9T2 (1)	2354 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PFW8 (1)	2344 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9Q554 (1)	2344 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PFV0 (1)	2333 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PSU9 (1)	2332 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PSV7 (1)	2319 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M3AR05 (1)	2318 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M3B129 (1)	2310 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PFV9 (1)	2307 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M3AY50 (1)	2293 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PSW2 (1)	2165 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M2BBB9 (1)	1740 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9Q9V1 (1)	1615 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:XP_005164147 (1)	1740 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009297860 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009297865 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009297866 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009297868 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_017210283 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330047 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330050 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330054 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330056 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330061 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330065 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330068 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330069 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330073 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330078 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330079 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330083 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330087 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330095 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330097 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330098 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330103 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330107 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330108 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330115 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330116 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021330117 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:CAI11857 (1)	1939 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAI11858 (1)	1938 aa	Select Tool ZFIN BLAST NCBI BLAST

cacna1aa CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH211-237K17 (1)	Genomic	GenBank:BX548009	128639	Select Tool MegaBLAST Ensembl
[BAC] DKEY-3F22 (1)	Genomic	GenBank:BX908773	51065	Select Tool MegaBLAST Ensembl

cacna1aa ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[EST] eu1553 (1)	Genomic	GenBank:DX503759	400	Select Tool ZFIN BLAST NCBI BLAST Ensembl