ZFIN Sequences for Gene: prpf39

ZFIN ID: ZDB-GENE-030616-420

ZFIN ID: ZDB-GENE-030616-420

SEQUENCE INFORMATION

Gene Name:	PRP39 pre-mRNA processing factor 39 homolog (yeast)
Gene Symbol:	prpf39

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001004520 (1)	2588 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073932198 (1)	1717 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073932199 (1)	1377 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073932200 (1)	1374 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XR_012395409 (1)	1758 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC096965 (1)	2952 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC116540 (1)	2608 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01000703 (1)	997 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01000707 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
Genomic	GenBank:AL591492 (1)	92083 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU856337 (1)	34717 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU693483	27359 nt	Select Tool MegaBLAST Ensembl
	GenBank:DX503491 (1)	215 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:JBMGRA010000020 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:Q1JPZ7 (1)	752 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58I285 (1)	476 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M3B4E2 (1)	381 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58I247 (1)	381 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58I238 (1)	380 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001004520 (1)	752 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073788299 (1)	476 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073788300 (1)	381 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073788301 (1)	380 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAI16541 (1)	752 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAD87784 (1)	752 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:Q1JPZ7 (1)	752 aa	Select Tool ZFIN BLAST NCBI BLAST

prpf39 CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[FOSMID] ZFOS-1053B4 (1)	Genomic	GenBank:CU856337	34717	Select Tool MegaBLAST Ensembl
[FOSMID] ZFOS-2171E4 (1)	Genomic	GenBank:CU693483	27359	Select Tool MegaBLAST Ensembl
[PAC] BUSM1-261O22 (2)	Genomic	GenBank:AL591492	92083	Select Tool MegaBLAST Ensembl

prpf39 ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[CDNA] MGC:136443 (1)	RNA	GenBank:BC116540	2608	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] eu1074 (1)	Genomic	GenBank:DX503491	215	Select Tool ZFIN BLAST NCBI BLAST Ensembl