ZFIN Sequences for Gene: col1a2

ZFIN ID: ZDB-GENE-030131-8415

ZFIN ID: ZDB-GENE-030131-8415

SEQUENCE INFORMATION

Gene Name:	collagen, type I, alpha 2
Gene Symbol:	col1a2

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_182968 (1)	5182 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073930591 (1)	5044 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01004417 (1)	5613 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC071278 (1)	5182 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AJ318213 (2)	4197 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI384386 (1)	600 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CK683352 (1)	591 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI331637 (1)	467 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI331679 (1)	451 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI384877 (1)	438 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI331003 (1)	419 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AL925971 (1)	418 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CK738800 (1)	383 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AL919703 (1)	380 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI331401 (1)	314 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI617958 (1)	240 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI331244 (1)	144 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX640469 (1)	83435 nt	Select Tool MegaBLAST Ensembl
	GenBank:JBMGRA010000019 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:Q6IQX2 (1)	1352 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M2B6I3 (1)	1319 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58HXH1 (1)	1270 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_892013 (1)	1352 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073786692 (1)	1270 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAH71278 (1)	1352 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAC51030 (1)	1352 aa	Select Tool ZFIN BLAST NCBI BLAST

col1a2 CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] DKEY-104M9 (1)	Genomic	GenBank:BX640469	83435	Select Tool MegaBLAST Ensembl

col1a2 ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[CDNA] MGC:85701 (1)	RNA	GenBank:BC071278	5182	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] fa98d05 (2)	RNA	GenBank:AI331401	314	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AI331244	144	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] fa99g10 (1)	RNA	GenBank:AI331637	467	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AI331679	451	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] fb04c08 (1)	RNA	GenBank:AI331003	419	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] fb11d06 (1)	RNA	GenBank:AI384386	600	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AI384877	438	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] IMAGE:7145608 (1)	RNA	GenBank:CK683352	591	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] zehn2357	RNA	GenBank:AI617958	240	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT