ZFIN Sequences for Gene: grik1a

ZFIN ID: ZDB-GENE-030131-6502

ZFIN ID: ZDB-GENE-030131-6502

SEQUENCE INFORMATION

Gene Name:	glutamate receptor, ionotropic, kainate 1a
Gene Symbol:	grik1a

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:XM_009305317 (1)	3339 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_009305320 (1)	3325 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_009305319 (1)	3152 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_009305318 (1)	3145 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_001924003 (1)	3007 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01011972 (1)	3246 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CV491506 (1)	826 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CK139838 (1)	823 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CV491527 (1)	806 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EH546505 (1)	793 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EH543541 (1)	772 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EH564678 (1)	772 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EH567648 (1)	770 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EB961184 (1)	700 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BM101773 (1)	637 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BM157295 (1)	593 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BM071695 (1)	592 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BM071990 (1)	538 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BM101551 (1)	516 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BM316428 (1)	388 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:AL837524 (1)	202158 nt	Blast at MegaBLAST
	GenBank:CT573197 (1)	146332 nt	Select Tool MegaBLAST Ensembl
	GenBank:AL954816 (2)	97637 nt	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:A0A8M3BCZ5 (1)	919 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M3AWP9 (1)	914 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:E9QGN5 (1)	904 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M3B391 (1)	902 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:XP_001924038 (1)	904 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009303592 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009303593 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009303594 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009303595 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast

grik1a CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] DKEY-38P6 (1)	Genomic	GenBank:AL954816	97637	Select Tool MegaBLAST Ensembl
[BAC] DKEY-50P8 (1)	Genomic	GenBank:AL837524	202158	Blast at MegaBLAST
[BAC] DKEY-76A19 (1)	Genomic	GenBank:CT573197	146332	Select Tool MegaBLAST Ensembl

grik1a ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[EST] fv36b03 (1)	RNA	GenBank:BM101773	637	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BM101551	516	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT