ZFIN Sequences for Gene: hmgb1a

ZFIN ID: ZDB-GENE-030131-341

ZFIN ID: ZDB-GENE-030131-341

SEQUENCE INFORMATION

Gene Name:	high mobility group box 1a
Gene Symbol:	hmgb1a

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_199555 (1)	1270 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AY398358 (1)	1421 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC067193 (1)	1320 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQQ01007155 (1)	1285 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC045917 (1)	1282 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC165307 (1)	685 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI794044 (1)	510 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI522408 (1)	400 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI396747 (1)	250 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BM735893 (1)	212 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BM735894 (1)	212 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:CR753900	113731 nt	Select Tool MegaBLAST Ensembl
	GenBank:CABZ01017703 (1)	8093 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
Polypeptide	UniProtKB:Q6NX86 (1)	205 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_955849 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAH45917	205 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAH67193	205 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI65307	205 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAH45917 (1)		Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAH67193 (1)		Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI65307 (1)		Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAQ97791 (1)		Select Tool ZFIN BLAST NCBI BLAST

hmgb1a CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH211-167B13 (1)	Genomic	GenBank:CR753900	113731	Select Tool MegaBLAST Ensembl

hmgb1a ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[CDNA] MGC:56110 (2)	RNA	GenBank:BC045917	1282	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Polypeptide	GenPept:AAH45917	205	Select Tool ZFIN BLAST NCBI BLAST
[CDNA] MGC:77104 (1)	RNA	GenBank:BC067193	1320	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Polypeptide	GenPept:AAH67193	205	Select Tool ZFIN BLAST NCBI BLAST
[CDNA] MGC:192395 (1)	RNA	GenBank:BC165307	685	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Polypeptide	GenPept:AAI65307	205	Select Tool ZFIN BLAST NCBI BLAST
[EST] fb23c02 (1)	RNA	GenBank:AI522408	400	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AI396747	250	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] fc36f10 (1)	RNA	GenBank:AI794044	510	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] tdsubc_1a5 (2)	RNA	GenBank:BM735894	212	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BM735893	212	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT