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General Information
ZIRC
ZFIN ID: ZDB-GENE-030131-341
Gene Name: high mobility group box 1a
Gene Symbol: hmgb1a
Sequence Ontology ID : SO:0000704

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Previous Names: hmgb1, ik:tdsubc_1a5, tdsubc_1a5, wu:fb23c02, xx:tdsubc_1a5, zgc:77104 (1)

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(Including Attributions)
Location: Chr: 10 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA binding activity, bending and transcription factor binding activity. Involved in axon regeneration; forebrain development; and response to cold. Localizes to the plasma  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la027179Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH hmgb1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH hmgb1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process response to cold (more)
    Cellular Component plasma membrane (more)
    Molecular Function DNA binding (more)
    GO Terms (all 27)
    TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    MARKER RELATIONSHIPS
    hmgb1aContained in: [BAC] CH211-167B13 (order this)
    hmgb1aEncodes: [EST] fb23c02, fc36f10 (1) (order this), tdsubc_1a5
    [cDNA] MGC:56110 (1) (order this), MGC:77104 (1) (order this), MGC:192395 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199555 (1) 1422bp
    Genomic GenBank:CR753900 113731bp
    Select Tool
    Polypeptide UniProtKB:Q6NX86 (1) 205aa
    Sequence Clusters UniGene:150247 (1)
    Sequence Information (all 28)
    OTHER hmgb1a GENE PAGES
  • Alliance (1)
  • Gene:321622 (1)
  • Ensembl(GRCz11):ENSDARG00000099175 (1)
  • ORTHOLOGY for hmgb1a (Chr: 10)
    CITATIONS (77)