ZFIN Sequences for Gene: clcn3

ZFIN ID: ZDB-GENE-030131-1699

ZFIN ID: ZDB-GENE-030131-1699

SEQUENCE INFORMATION

Gene Name:	Cl-/H+ antiporter 3
Gene Symbol:	clcn3

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:XM_009302926 (1)	3783 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073908014 (1)	3775 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005166349 (1)	3770 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005166345 (1)	3728 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_001923468 (1)	3723 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073908013 (1)	3652 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005166348 (1)	3647 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073908015 (1)	3626 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_068218355 (1)	3613 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_003198891 (1)	3566 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005166350 (1)	3490 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XR_012383071 (1)	3652 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XR_012383070 (1)	3632 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQQ01019648 (1)	3491 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC128843 (1)	2386 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC127589 (1)	2232 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI558287 (1)	593 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI558940 (1)	201 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01004121 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
Genomic	GenBank:BX324230 (1)	179902 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX957339 (1)	163091 nt	Select Tool MegaBLAST Ensembl
	GenBank:CT030698 (1)	44310 nt	Select Tool MegaBLAST Ensembl
	GenBank:JBMGRA010000007 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:A0A8M9Q887 (1)	874 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9QHF3 (1)	849 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PPD0 (1)	824 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9Q239 (1)	824 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58G319 (1)	824 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58G325 (1)	824 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9Q891 (1)	799 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AB32TNM4 (1)	799 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58G317 (1)	799 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:XP_001923503 (1)	874 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005166402 (1)	874 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_003198939 (1)	849 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005166405 (1)	824 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005166406 (1)	824 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009301201 (1)	824 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073764114 (1)	824 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073764115 (1)	824 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005166407 (1)	799 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_068074456 (1)	799 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073764116 (1)	799 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAI28844 (1)	752 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI27590 (1)	727 aa	Select Tool ZFIN BLAST NCBI BLAST

clcn3 CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH211-14J11 (1)	Genomic	GenBank:CT030698	44310	Select Tool MegaBLAST Ensembl
[BAC] CH211-42C5 (1)	Genomic	GenBank:BX324230	179902	Select Tool MegaBLAST Ensembl

clcn3 ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[EST] fb78c02 (1)	RNA	GenBank:AI558287	593	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AI558940	201	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT