ZFIN Sequences for Gene: vps18

ZFIN ID: ZDB-GENE-020419-33

ZFIN ID: ZDB-GENE-020419-33

SEQUENCE INFORMATION

Gene Name:	VPS18 core subunit of CORVET and HOPS complexes
Gene Symbol:	vps18

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_173245 (1)	3542 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01006113 (1)	3601 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AF506204 (1)	3553 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC086828 (1)	3542 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC154756 (1)	3529 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC171720 (1)	3250 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AW077337 (1)	746 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AW077575 (1)	676 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BE693182 (1)	637 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AW453857 (1)	256 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:AL929049 (1)	223182 nt	Blast at MegaBLAST
	GenBank:CR759734 (1)	185855 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX897725 (1)	170125 nt	Select Tool MegaBLAST Ensembl
	GenBank:JBMGRA010000020 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:B7ZVV5 (1)	974 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:P59015 (1)	974 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_775352 (1)	974 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAH86828 (1)	974 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI54757 (1)	974 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI71720 (1)	974 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAM34648 (1)	974 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAI11898 (1)	974 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:P59015 (1)	974 aa	Select Tool ZFIN BLAST NCBI BLAST

vps18 CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH211-244P18 (1)	Genomic	GenBank:BX897725	170125	Select Tool MegaBLAST Ensembl
[BAC] DKEY-14A13 (1)	Genomic	GenBank:AL929049	223182	Blast at MegaBLAST

vps18 ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[CDNA] MGC:103535 (2)	RNA	GenBank:BC086828	3542	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[CDNA] MGC:173734 (1)	RNA	GenBank:BC154756	3529	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Polypeptide	GenPept:AAI54757	974	Select Tool ZFIN BLAST NCBI BLAST
[CDNA] MGC:198447 (2)	RNA	GenBank:BC171720	3250	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Polypeptide	GenPept:AAI71720	974	Select Tool ZFIN BLAST NCBI BLAST
[EST] fj35h10 (1)	RNA	GenBank:AW077337	746	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AW077575	676	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] zehl0587	RNA	GenBank:BE693182	637	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AW453857	256	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT