ZFIN Sequences for Gene: CH211-106A19

ZFIN ID: ZDB-BAC-050218-637

ZFIN ID: ZDB-BAC-050218-637

SEQUENCE INFORMATION

BAC Name:	CH211-106A19

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001122749 (1)	4703 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_001122747 (1)	3529 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_200182 (1)	2770 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_001122748 (1)	2427 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:NM_199929 (1)	2161 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005165110 (1)	2751 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_009301313 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021476216 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021476217 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XM_021476218 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RefSeq:XR_002458776 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	GenBank:GDQH01004176 (1)	6883 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01042030 (1)	6205 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQQ01007201 (1)	3644 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01001987 (1)	3552 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC163506 (1)	3529 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC066734 (1)	2770 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC155269 (1)	2722 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AY398424 (1)	2251 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC045485 (1)	2207 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC124419 (1)	2162 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC045367 (1)	2161 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQQ01010670 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
Genomic	GenBank:BX005447 (1)	283185 nt	Blast at MegaBLAST
	GenBank:BX088551	184417 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX537282 (1)	124378 nt	Select Tool MegaBLAST Ensembl
	GenBank:CR381680 (1)	47558 nt	Select Tool MegaBLAST Ensembl
	GenBank:DU644764 (1)	497 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:DU644987 (1)	385 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
Polypeptide	UniProtKB:A2BEG0 (1)	849 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9Q8S0 (1)	822 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A2BEG1 (1)	808 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A2BEG3 (1)	782 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PKA3 (1)	708 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:Q7ZVY1 (1)	619 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M3AS31 (1)	555 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PXS1 (1)	463 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:Q7ZVM6 (1)	342 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M2BCA8 (1)	341 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001116219 (1)	849 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:NP_956476 (1)	342 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:NP_001116220 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:NP_001116221 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:NP_956223 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005165167 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_009299588 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021331891 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021331892 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021331893 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAI63506 (1)	849 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAH45367 (1)	619 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI24420 (1)	578 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAH45485 (1)	342 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAH66734 (1)	342 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI55270 (1)	342 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAQ97857 (1)	342 aa	Select Tool ZFIN BLAST NCBI BLAST

CH211-106A19 CONTAINS

Marker	Type	Accession #	Length (nt/aa)	Analysis
[GENE] atp6v0a2b (4)	RNA	RefSeq:NM_001122747	3529	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01001987	3552	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC163506	3529	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:BX005447	283185	Blast at MegaBLAST
	Genomic	GenBank:BX088551	184417	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:A2BEG0	849	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001116219	849	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:AAI63506	849	Select Tool ZFIN BLAST NCBI BLAST
[GENE] dgcr8 (19)	RNA	RefSeq:NM_001122749	4703	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GDQH01004176	6883	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC124419	2162	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:BX005447	283185	Blast at MegaBLAST
	Genomic	GenBank:BX088551	184417	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:DU644764	497	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	Genomic	GenBank:DU644987	385	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	Polypeptide	UniProtKB:A2BEG3	782	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001116221		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:AAI24420	578	Select Tool ZFIN BLAST NCBI BLAST
[GENE] osbp2b (5)	RNA	RefSeq:XR_002458776		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_021476218		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_021476217		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_021476216		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_009301313		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	RNA	RefSeq:NM_001122748	2427	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GDQQ01010670		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
	Genomic	GenBank:BX005447	283185	Blast at MegaBLAST
	Genomic	GenBank:BX088551	184417	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:BX537282	124378	Select Tool MegaBLAST Ensembl
	Genomic	GenBank:CR381680	47558	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:A0A8M9Q8S0	822	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A2BEG1	808	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0A8M9PKA3	708	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0A8M3AS31	555	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0A8M9PXS1	463	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_021331893		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:XP_021331892		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:XP_021331891		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:XP_009299588		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:NP_001116220		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
[GENE] tia1l (16)	RNA	RefSeq:NM_200182	2770	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	RefSeq:XM_005165110	2751	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GDQQ01007201	3644	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC066734	2770	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC155269	2722	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AY398424	2251	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC045485	2207	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:BX005447	283185	Blast at MegaBLAST
	Genomic	GenBank:BX088551	184417	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:Q7ZVM6	342	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	UniProtKB:A0A8M2BCA8	341	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:XP_005165167		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	RefSeq:NP_956476	342	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:AAQ97857	342	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAI55270	342	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAH66734	342	Select Tool ZFIN BLAST NCBI BLAST
	Polypeptide	GenPept:AAH45485	342	Select Tool ZFIN BLAST NCBI BLAST
[GENE] trmt2a (12)	RNA	RefSeq:NM_199929	2161	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:GFIL01042030	6205	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BC045367	2161	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Genomic	GenBank:BX005447	283185	Blast at MegaBLAST
	Genomic	GenBank:BX088551	184417	Select Tool MegaBLAST Ensembl
	Polypeptide	UniProtKB:Q7ZVY1	619	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	Polypeptide	RefSeq:NP_956223		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	Polypeptide	GenPept:AAH45367	619	Select Tool ZFIN BLAST NCBI BLAST