Mapping Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
9	53.9 cM	z21824	Boston MGH Cross (MGH)	Fishman, Mark C.	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
b460	Feature	9		An et al., 2012	An, M. and Henion, P.D. (2012, Int. J. Dev. Biol. 56(4):223-237) Used Linkage analysis to map tstb460 to Chr. 9.
z54324	SSLP	9		An et al., 2012	An, M. and Henion, P.D. (2012, Int. J. Dev. Biol. 56(4):223-237) Used Linkage analysis to map tstb460 to Chr. 9.
t24412	Feature	9	0.35 cM	Fischer et al., 2007	Fischer et al. (2007.Cell Cycle 6:2962-2969) reports mapping t24412 to LG9,  ... Fischer et al. (2007.Cell Cycle 6:2962-2969) reports mapping t24412 to LG9, between SSLP markers z59677 and z21824, and adjacent to z24581.
z24581	SSLP	9		Fischer et al., 2007	Fischer et al. (2007.Cell Cycle 6:2962-2969) reports mapping t24412 to LG9,  ... Fischer et al. (2007.Cell Cycle 6:2962-2969) reports mapping t24412 to LG9, between SSLP markers z59677 and z21824, and adjacent to z24581.
z59677	SSLP	9		Fischer et al., 2007	Fischer et al. (2007.Cell Cycle 6:2962-2969) reports mapping t24412 to LG9,  ... Fischer et al. (2007.Cell Cycle 6:2962-2969) reports mapping t24412 to LG9, between SSLP markers z59677 and z21824, and adjacent to z24581.

OTHER MAPPING INFORMATION

Chr 9 An et al., 2012 An, M. and Henion, P.D. (2012, Int. J. Dev. Biol. 56(4):223-237) Used Linkage analysis to map  ... An, M. and Henion, P.D. (2012, Int. J. Dev. Biol. 56(4):223-237) Used Linkage analysis to map tstb460 to Chr. 9.

Primer Sets:

Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
AB	183,179,0,173		60.0
Forward Primer	CTGTCGCCACACATACAGCT
Reverse Primer	TGAAGTTTTGGACCATCAAGAA
IND	179,0,181		60.0
Forward Primer	CTGTCGCCACACATACAGCT
Reverse Primer	TGAAGTTTTGGACCATCAAGAA
TU	183,0,181		60.0
Forward Primer	CTGTCGCCACACATACAGCT
Reverse Primer	TGAAGTTTTGGACCATCAAGAA
EKW	181,0,183		60.0
Forward Primer	CTGTCGCCACACATACAGCT
Reverse Primer	TGAAGTTTTGGACCATCAAGAA