Genomic Feature
pfu2
- ID
- ZDB-ALT-240703-8
- Name
- pfu2
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Alsina Lab
- Current Source
- Other Pages
-
Notes
| Comment | Citation |
|---|---|
| 2573 bp deletion on exon 2 of gene sall1a. The deletion is found at ... | Zebrafish Nomenclature Committee |
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 7: 37384068 - 37386640 (GRCz11) (1) Details
- Nucleotide change
- CAGTGGTGTTGGAACTGGCCATGGAACGCTGGGAAGCACTGGGTCCAATCTGGGGAGCTC TGTCATCTCTGCCTCACTACCTCAGCTGGGTAACTTGACTGAGCTGGGCAATTTTTCCAT GATCAACAGCAATGTCATTATTGAAAACCTACAGAGCACCAAAGTGGCTGTGGCCCAATT TTCTCAAGAAACCAGAGCAACAGGGGGGCAAAGGGTGGCTGTGCCAGCCCTCATGGAGCA GCTCTTGGCCCTGCAGCAGCAGCAGATTCACCAGCTACAGCTCATAGAGCAGATTCGTCA CCAGATTCTTCTGTTAGCCTCACAGTCACCTGAGCTCCAAGCACCCCCTAGTTCTTCCCC AGTGACCTTAGGTTCAGGTACTAGCCCACTAACCACTCTTAGTTCCCATTTGTCTCAGCA GTTGGCAGCTGCCGCAGGGTTAGCACAGAGCATAGCTAGCCAGTCTGCGAGCATTAGCAG TTTGAAACAGATGGCTAATGTTGCGCAGCTACCTCAGAGCAATTCCAGTGTGGGAGAGTC ATCTCAAAGCCTTGCAGCACCAGGGCCTGCTCCAGTTAATGCCCAACCTTTAGAAAAGAG GCCAGGCAATGCAGGAAGCTTGCATCCTCCATTAGGAAACCCATCACTTGCAAAGTCATC CACACCAGCCTTTGCAATGGGAAACCTTTTGAATCCTGTGGCTAATACCCTTCTACCTCA GCCCCCGCCAGGCAACCCAATATTTTCCAGTGCACTGCCGAGCGTCGGTTCCACAGTTGA GGATCTCAATTCACTGGCTGCACTGGCTCAACAAAGAAAAGGCAAGCCACCCAATGTTTC TTCTTTTGAACCGAAGAGTAGCTCTGAGGACACATTTTTCAAGCATAAATGCAGGTTTTG TGGCAAGGTGTTTGGTAGTGACAGTGCACTGCAGATTCACTTACGTTCTCATACAGGTGA AAGGCCATACAAATGCAACATATGTGGCAACCGCTTTTCCACTCGTGGTAACTTAAAGGT TCATTTTCAGCGTCATAAAGAGAAGTATCCACACATTCAGATGAACCCATACCCTGTCCC AGAGCATCTAGACAATATTCCAACAAGTACTGGCATTCCCTATGGTATGTCTATGCCCCC TGAAAAACCAGTGACCAGCTGGTTGGATAGTAAACCTGTTCTGTCCACTCTGACATCCTC TGTTGGCATGTTACTTCCACCAACTATACCAAGTCTGCCTCCATTCATAAAAAAGGAAGA GAATAACTCACTGGCTATAAGCAGCCCTTCTCATTCTGCTAAAAGCGACTCAGGTCCTGC TGACACACCCATGAAGAATACAGATAGTGTGTTGGAGGAAGGTGAGAGCACAACCCTGCC TACCTCAAACGGAAAAGCTGAAGAAAACAACCAGTCCTCCAATTTATTATCTAACATGAG CTCTGCGGTGGAGGGTACAATAGAGTACACCACCTCCAACAGTCCTCCGATGGCCACTAA CCCACTCATGCCTCTGATGTCAGAACAGTTCAAAGCTAAATTTCCTTTTGGGGGTCTTCT CGATCCTCTCCAAGGCTCAGAAACATCAAAACTTCAGCAACTTGTTGAGAACATAGACAG GAAGGTGGCAGATCCCAATGAGTGTGTTATCTGTCATCGTATTCTTAGTTGCCAGAGTGC ACTGAAAATGCACTACCGCACGCACACAGGGGAGAGGCCTTTCAAATGTAAAGTGTGTGG TCGTGCCTTCACCACCAAGGGCAACCTCAAGACTCATTACAGTGTCCATCGAGCTATGCC GCCACTGAGAGTCCAGCATTCATGTCCTATTTGCCAGAAGAAGTTCACAAATGCTGTGGT GTTGCAGCAGCACATTCGCATGCACATGGGTGGCCAGATCCCCAACACCCCACTTCCTGA CAATTATCCAGAATCCATGGGATCCGATGCTGGATCTTTTGATGAGAGAAACATTGATGA TCTTGACAACTTCTCTGATGACAACATGGAAGGAATTGAGGATGGACCAGACAGCAGCAT TCCAGACACACCAAAGTCAGTTGATGCATCTCAAGACAGCCTCTGTTCATCTCCTACTCT ACATGAGTCATTTGGCATGGACGAGAGGATCCAGGAGAAGAGTGCCAACCATGGAGCAGG AGAGGAAGTGCAGTATGATCAAGGGAAATCAGTGGAGAACGGTTTAGTGGAAGGAGACAG ATTCACAAATGACTCCTCTTCACTGGGGGGTGACATAGAAAGCCAAAGTGCCGGAAGTCC AGCTGTCTCTGAATCTACCTCTTCCATGCAAGCTCCGTCACCCTCTAATGGTATATTCCA ACAACAAAAGTCTCCTAGTATGGAAGATAGGCAGCAAAGGGCATTGTCATTGGAGCACAT TAGTGCAAGTCTCATGCATTCTAATTCTGCCAGTCCTGGAGCTCTGGATCTTACTTCAGT TAACTCATCTAAAGATCCTATTAGCATGCTTTTCCCCTTCCGTGAGCGAGGCACCTTGAA AAATACAGCATGTGATATCTGTGGCAAGACGTTTGCCTGCCAGAGTGCCTTGG/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 2573 bp deleted in Exon 2 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
AGGATAAGCATTAAACTGATTAACAGAAGATTAACAACAAAAGAATTTGAACAGATAAAGCTGCTTCTTCAGATACAAAACATCTCTAATCGCTAATCCCCCTGTTCCCCCCTCTTATTTTCTTCTACAGGGGACACAGAGACCAACCCGGACGACTCCCCCTGTAAAGACTCGGGTGCCCATGTCTGCAGCAGATGTTGCGCAGAGTTCTTTGAACTATCGGATCTTGAACAACACCAGAAGAATTGCACTAAGAATCAATTAGTTCTAATTGTGAATGAAAATCCAGTGTCTCCTTCCGGAACCTTCTCCCCAGGCTCCTCTCCTCATAATCCTGATGAGCAGATGAATGATACAACTAATAACACAGATCAAGCAGAGTTGACTGACCTTTTGGAGCAAAACATACTTGACAAAGAGGAGGCCATGGACACAGAGATGTCAGGAGTCTCTGCACCACACAATGATGGAAATGGTCGTATGGCAGGTAGCAGCCCACT
CAGTGGTGTTGGAACTGGCCATGGAACGCTGGGAAGCACTGGGTCCAATCTGGGGAGCTC TGTCATCTCTGCCTCACTACCTCAGCTGGGTAACTTGACTGAGCTGGGCAATTTTTCCAT GATCAACAGCAATGTCATTATTGAAAACCTACAGAGCACCAAAGTGGCTGTGGCCCAATT TTCTCAAGAAACCAGAGCAACAGGGGGGCAAAGGGTGGCTGTGCCAGCCCTCATGGAGCA GCTCTTGGCCCTGCAGCAGCAGCAGATTCACCAGCTACAGCTCATAGAGCAGATTCGTCA CCAGATTCTTCTGTTAGCCTCACAGTCACCTGAGCTCCAAGCACCCCCTAGTTCTTCCCC AGTGACCTTAGGTTCAGGTACTAGCCCACTAACCACTCTTAGTTCCCATTTGTCTCAGCA GTTGGCAGCTGCCGCAGGGTTAGCACAGAGCATAGCTAGCCAGTCTGCGAGCATTAGCAG TTTGAAACAGATGGCTAATGTTGCGCAGCTACCTCAGAGCAATTCCAGTGTGGGAGAGTC ATCTCAAAGCCTTGCAGCACCAGGGCCTGCTCCAGTTAATGCCCAACCTTTAGAAAAGAG GCCAGGCAATGCAGGAAGCTTGCATCCTCCATTAGGAAACCCATCACTTGCAAAGTCATC CACACCAGCCTTTGCAATGGGAAACCTTTTGAATCCTGTGGCTAATACCCTTCTACCTCA GCCCCCGCCAGGCAACCCAATATTTTCCAGTGCACTGCCGAGCGTCGGTTCCACAGTTGA GGATCTCAATTCACTGGCTGCACTGGCTCAACAAAGAAAAGGCAAGCCACCCAATGTTTC TTCTTTTGAACCGAAGAGTAGCTCTGAGGACACATTTTTCAAGCATAAATGCAGGTTTTG TGGCAAGGTGTTTGGTAGTGACAGTGCACTGCAGATTCACTTACGTTCTCATACAGGTGA AAGGCCATACAAATGCAACATATGTGGCAACCGCTTTTCCACTCGTGGTAACTTAAAGGT TCATTTTCAGCGTCATAAAGAGAAGTATCCACACATTCAGATGAACCCATACCCTGTCCC AGAGCATCTAGACAATATTCCAACAAGTACTGGCATTCCCTATGGTATGTCTATGCCCCC TGAAAAACCAGTGACCAGCTGGTTGGATAGTAAACCTGTTCTGTCCACTCTGACATCCTC TGTTGGCATGTTACTTCCACCAACTATACCAAGTCTGCCTCCATTCATAAAAAAGGAAGA GAATAACTCACTGGCTATAAGCAGCCCTTCTCATTCTGCTAAAAGCGACTCAGGTCCTGC TGACACACCCATGAAGAATACAGATAGTGTGTTGGAGGAAGGTGAGAGCACAACCCTGCC TACCTCAAACGGAAAAGCTGAAGAAAACAACCAGTCCTCCAATTTATTATCTAACATGAG CTCTGCGGTGGAGGGTACAATAGAGTACACCACCTCCAACAGTCCTCCGATGGCCACTAA CCCACTCATGCCTCTGATGTCAGAACAGTTCAAAGCTAAATTTCCTTTTGGGGGTCTTCT CGATCCTCTCCAAGGCTCAGAAACATCAAAACTTCAGCAACTTGTTGAGAACATAGACAG GAAGGTGGCAGATCCCAATGAGTGTGTTATCTGTCATCGTATTCTTAGTTGCCAGAGTGC ACTGAAAATGCACTACCGCACGCACACAGGGGAGAGGCCTTTCAAATGTAAAGTGTGTGG TCGTGCCTTCACCACCAAGGGCAACCTCAAGACTCATTACAGTGTCCATCGAGCTATGCC GCCACTGAGAGTCCAGCATTCATGTCCTATTTGCCAGAAGAAGTTCACAAATGCTGTGGT GTTGCAGCAGCACATTCGCATGCACATGGGTGGCCAGATCCCCAACACCCCACTTCCTGA CAATTATCCAGAATCCATGGGATCCGATGCTGGATCTTTTGATGAGAGAAACATTGATGA TCTTGACAACTTCTCTGATGACAACATGGAAGGAATTGAGGATGGACCAGACAGCAGCAT TCCAGACACACCAAAGTCAGTTGATGCATCTCAAGACAGCCTCTGTTCATCTCCTACTCT ACATGAGTCATTTGGCATGGACGAGAGGATCCAGGAGAAGAGTGCCAACCATGGAGCAGG AGAGGAAGTGCAGTATGATCAAGGGAAATCAGTGGAGAACGGTTTAGTGGAAGGAGACAG ATTCACAAATGACTCCTCTTCACTGGGGGGTGACATAGAAAGCCAAAGTGCCGGAAGTCC AGCTGTCTCTGAATCTACCTCTTCCATGCAAGCTCCGTCACCCTCTAATGGTATATTCCA ACAACAAAAGTCTCCTAGTATGGAAGATAGGCAGCAAAGGGCATTGTCATTGGAGCACAT TAGTGCAAGTCTCATGCATTCTAATTCTGCCAGTCCTGGAGCTCTGGATCTTACTTCAGT TAACTCATCTAAAGATCCTATTAGCATGCTTTTCCCCTTCCGTGAGCGAGGCACCTTGAA AAATACAGCATGTGATATCTGTGGCAAGACGTTTGCCTGCCAGAGTGCCTTGG/- ACATCCATTACCGTAGCCATACCAAAGAGAGACCATTTATTTGCACAGTATGCAACCGGGGCTTTTCCACCAAGGGGAAC ... - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None