ZFIN ID: ZDB-GENE-020228-2
Gene Name: spalt-like transcription factor 1a
Gene Symbol: sall1a
Sequence Ontology ID : SO:0000704

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Previous Names: sall1 (1), spa1a (1), spalt1a (1), cb896 (1), id:ibd5077, sb:eu809

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 18 figures from 8 publications
Directly Submitted Expression Data: 1 figure (1 image) from Kudoh et al., 2001 [ibd5077]
  6 figures (16 images) from Thisse et al., 2001 [cb896]
  6 figures (28 images) from Thisse et al., 2005 [eu809]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa11237 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38627 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40952 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sall1a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Townes-Brocks syndrome Townes-Brocks branchiootorenal-like syndrome 107480
    Townes-Brocks syndrome 1 107480
    DISEASE ASSOCIATED WITH sall1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process positive regulation of fibroblast growth factor receptor signaling pathway (more)
    Cellular Component nucleus (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR013087 (1)
  • InterPro:IPR036236 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS50157 (1)
  • Pfam:PF00096 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sall1a-001 (1) 6552
    sall1a-002 (1) 6651
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sall1a No data available
    MARKER RELATIONSHIPS
    sall1aContained in: [BAC] DKEY-245J10 (1) (order this)
    sall1aContains: [SSLP] z26643 (1)
    sall1aEncodes: [EST] cb896 (1) (order this), eu809 (1), ibd5077 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001146014 (1) 5158bp
    Genomic RefSeq:NW_018394702 (1) Blast at MegaBLAST
    Polypeptide UniProtKB:F1QI36 (1) 1313aa
    Sequence Clusters UniGene:12380 (1)
    Sequence Information (all 23)
    OTHER sall1a GENE PAGES
  • Alliance (1)
  • Gene:555721 (1)
  • VEGA:OTTDARG00000027387 (1)
  • ORTHOLOGY for sall1a (Chr: 7)
    CITATIONS (26)