Genomic Feature

sh590

ID
ZDB-ALT-230623-3
Name
sh590
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Noel Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 25: 31613586 - 31613610 (GRCz11) (1) Details
Nucleotide change
TGTAGGGATCCTCAATCCTGAAGGC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
25 bp deleted in Exon 6 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TTCACCTTCATAAAAAAATGAAAACAAATTTGGAACAAGTAAAAAGTGAGTTAAAGGTGACAGAATTTTCAGTTTTGGATGAACTCTCCTTTTAATGTATGGTAAATTTAGGGTGAAATATCCTTTATTTTATTTAGGGATGGTAGCGATTACTTGATCTATTGATTATCAATAACCTTTTAAACAATTGAACTTATCGATGACTGATTAAGCATGCATATTTAAAGGTTAAGTAATGCTTTGTGCTGTGAGGCACGTCCACATATTACACAATCAAGTGTGTGCAGTTTACCTTTTCTAATTCCAAGTATTTTTAAATGAAATATTTTCCTCTGATTTATAATACAGAAAAAAAATGTGTGTTGATGAGGAGATAAAAAAGCCACAACTCTGTTGTGCATGTATGCTAATGTGCAGATACAACATGAGAAATTAACATTAAAATGATTTCAAAGAAAATGCGATTGCTTTTTTAATGCCTTTACTTTGAATTCTGGGGC
TGTAGGGATCCTCAATCCTGAAGGC/- AGGATCCAAAACCCTAAAAATGACCTTCAGAAACAAAAGAAACAACAAGTCAACAAAACAAATCCAGTATTAAAGAAAGAATTCACTAGAAGGGCAGTAAATTTCCAGTTGCTCACCTCGCCCTCAGTTGAGGGTTCGATGTCAGAGTAGCGAGTATCACATATAACATCGTCAACTTTGGTCATTGGCCCATGAGAGACAGAAGGGAAGGAGGACTCACAGTCATAAGCAAAGTAACGGTAAACTTGCCAAGTGTTCCCGAAGTCTGCCGAACGCTCGATCACCATTGCAGCCGGTCGGAACGTCTGTGATAGAGGACATAAATAAGGCAATATTACTTCCAATATTGACCATAATCATGTTTTACCAGGATTGCCCCTCACACAACACTTTTACTCATTATTTCACTTTGAATTTTAATTGTATTGAAACTGACATACCAAGATCTCATAACACTAAATACTGACAAAATGTTCATTCAATTATCATTTTCTTTTCGG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations