Genomic Feature
hsi12
- ID
- ZDB-ALT-220228-16
- Name
- hsi12
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Berman Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 1: 26374311 - 26376478 (GRCz11) (1) Details
- Nucleotide change
- AGACGGAAAAAAGTCATATACTTGCAAAAATCAGTGCCACTCAGCAGACAGACTTTCTCACCAAGCACCAAAATGGAGATCAGTCACCCGAAGTCTTGTCTCAGCAGAAGGTCCCTGCTAACTTGCAGGGGATATTTGATCAAAGTATGTTTGGAATGAAAGGACAGATGAAACACGCTCTTAGTGAACAGGCACTTTTGGACTTTCACCAGACCAAAACATTGGTGAATGGAAACGAGAACCCAAGGATTTGGGATAAAAGTGAGGCAGGAATGGAAAACCGATTAGAGGTATTTCCCAAACATAACAAGGCAGGGGATTTAACACATGCTAAAATAAACTGTAACTTTACAAATGGTGATTTATTCTCACTGTCACGGAACAAGCAAGTTCAAATGCCCAATGGTGCTACAACAAGTCCTCCTTCAGTAAAGGGTACAACTGGTGACCTCTTAGAGAAAACATTGTCTCAGTATTACCCAGAGCATGTGTCCATTGCACCTCAAACCAACTCATCTCAAGTAGATCAGGTCACCAGCAACCTGCCTGATCAGGCAACTTCTTCACCTTCATTTACCTCAGGTTTTCCTATTTCACCCCAAATATCTGCCTCAGAGACACTTGTCAAGGCACCTCCCGAAGTACAAAACAGCAATGGCTATAACCCTGAACTTGCAGTAAATGGATACTCCAGTTTTGCAGCTGAGCAAAAGAAGCCTGCTTATTCTCTGTCTGATCTCCCAGAGCTAAGTCAGAAAGATTCAGAGTCTAATGTGCCATCACAGACAGTCGTCAATGGTTCCTCACAAATTCAAGAAGATAGAGAAGCCCTTCCAAATGACTCTGAGTGTGTAAACATGTTCTCCAAATCCAATCAGAATTTAAGTCATGGATCTTATACATTGCCCCCGGTGACAGCAGGTTCCCCCTCACAAACCTCTCAGACAGGTCAGTATAACCCACAGATTAAAGTGCCACAGAAAAAAACAACTGATGAAAACCTCCATGGCAATAGAGACTTTTCCTTGCTTCAGCAACAGACTCATGAGCCACAAGCAGTAGAGAGCAAGTTGATTCCCCAGGCATGTACTTCCCCTTCTCAAAATCGAAACAATGATCAAGACAACAAGTCTAAATTAGGACTAGAAAAAACACTGTCAAAGGGTACAGATCCATCATCCCAGATGGAATGGATAGATTTAAACTCAACTTCTGCTTCAACACCATCTACTGAACACTCCCAGATGTGGGATTTGTTCCTTCCACAGACCAACATACAGCAACATACAGTCCCACAGAGTCAAAGTCAATGTATAAATTCCATTCCCCCAAACAACTTTCAGTCTCACAATTTCAGTAATTCCAGTTTTCCCTCACATGAAATTGAGGCACAAGAGAACAAAAACATGCTACCTCCTACACGGTTTCCCCATAGTGCTGCCCCTGAAAGTCAACAGAGAAATTCTGGTATGCACAATCATATTAACATGCAATTTAACAACCCGCAACATATGTCCCAGAAATTATGCAAAAATGATCAAGACCAGATACTATCCCCAAGCTTCCTTTCCCAGCTACCACCTACTGAAACTCATCAGCAAGCCACCAGCACATTTTCCAATCAGCTCCCTCAGGATAGGCAGAATATGCAAGCATCTCCACTATCACGAGATGCTTCCCGTAGTCAAGAAGTTGAGCCACTCCTAAAAAAGCTTAAAACAGAGGACTACCTTCATTCAGAATTCCAGATGTTACCTGCATGTATCAAAACACCAGCACAAGTTCAAATTTCAAGTAAGGCTATAAGAGAAAACTTTGGATTTCAAGACTCATCCAAGTCAAACACACCATCCTTGTTTAAAGAAGTAGAAGCTCTAACAGAAAGGAAACTCCAGCAGAACACAGAGTGCTCACAGAACATTAGTACAGGACAACAAATCTACCAGCAACCTCTCCAACATAGGATATACAATCATTCAGAATTCTCACAGTCACTGATTTCTCAATCACAACATTCACAAGCTTCTGATGGTCTTCAGATACCTGTTCGGACATTGACCAAAGCTGAATTCCATGAGTCCTTTGCCCAAATCCAGAGAGAGTCTCTCTCAAGCAATGGTGCTCAAATGGATGTTCAGAGGCATGCAGCTTTGCGAATGCACCTTCTG/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 2168 bp deleted in Exon 2 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TTTTATCTGAGTCTGCGAGATTCAATAGCATGTTAGAGTAAAAGCCATTAGAATGGGTATATGTACTACCCAACCCATGCCTGTGAGCTACTGGAAAACCCAAAGCATGCCAAAAATGACAAGTGTTTTTCAATTTTAAAAGACTTATTTCAGACATAGGGAGCAAAAGCTGTTCCTTCTGTTTGTTTTCCCTGCTTATCCCTTTTCAGCATATATCAACATAATTCATGATCTCTGTACACACAAATAGAGTAATGTAAATGCCATATCTAGAATACATTAGATTGAGTAAATTTAAGGTCTTGATAAGGTTTCTACTTTCCATAAGCTTGCAATTGTATAAACAGTTCAGATCGTTAGCCCTTGCCTCACTATTACATAAGAACTACAGTAAATGATATATTTTTACAATTATTGGTATTTTTTCCATTCTTCTGTGTAGGGCAGCCTTGTGAATGGACCCAGAGCAGACCAGATGGAAACAGAAAAGACCAGCAATG
AGACGGAAAAAAGTCATATACTTGCAAAAATCAGTGCCACTCAGCAGACAGACTTTCTCACCAAGCACCAAAATGGAGATCAGTCACCCGAAGTCTTGTCTCAGCAGAAGGTCCCTGCTAACTTGCAGGGGATATTTGATCAAAGTATGTTTGGAATGAAAGGACAGATGAAACACGCTCTTAGTGAACAGGCACTTTTGGACTTTCACCAGACCAAAACATTGGTGAATGGAAACGAGAACCCAAGGATTTGGGATAAAAGTGAGGCAGGAATGGAAAACCGATTAGAGGTATTTCCCAAACATAACAAGGCAGGGGATTTAACACATGCTAAAATAAACTGTAACTTTACAAATGGTGATTTATTCTCACTGTCACGGAACAAGCAAGTTCAAATGCCCAATGGTGCTACAACAAGTCCTCCTTCAGTAAAGGGTACAACTGGTGACCTCTTAGAGAAAACATTGTCTCAGTATTACCCAGAGCATGTGTCCATTGCACCTCAAACCAACTCATCTCAAGTAGATCAGGTCACCAGCAACCTGCCTGATCAGGCAACTTCTTCACCTTCATTTACCTCAGGTTTTCCTATTTCACCCCAAATATCTGCCTCAGAGACACTTGTCAAGGCACCTCCCGAAGTACAAAACAGCAATGGCTATAACCCTGAACTTGCAGTAAATGGATACTCCAGTTTTGCAGCTGAGCAAAAGAAGCCTGCTTATTCTCTGTCTGATCTCCCAGAGCTAAGTCAGAAAGATTCAGAGTCTAATGTGCCATCACAGACAGTCGTCAATGGTTCCTCACAAATTCAAGAAGATAGAGAAGCCCTTCCAAATGACTCTGAGTGTGTAAACATGTTCTCCAAATCCAATCAGAATTTAAGTCATGGATCTTATACATTGCCCCCGGTGACAGCAGGTTCCCCCTCACAAACCTCTCAGACAGGTCAGTATAACCCACAGATTAAAGTGCCACAGAAAAAAACAACTGATGAAAACCTCCATGGCAATAGAGACTTTTCCTTGCTTCAGCAACAGACTCATGAGCCACAAGCAGTAGAGAGCAAGTTGATTCCCCAGGCATGTACTTCCCCTTCTCAAAATCGAAACAATGATCAAGACAACAAGTCTAAATTAGGACTAGAAAAAACACTGTCAAAGGGTACAGATCCATCATCCCAGATGGAATGGATAGATTTAAACTCAACTTCTGCTTCAACACCATCTACTGAACACTCCCAGATGTGGGATTTGTTCCTTCCACAGACCAACATACAGCAACATACAGTCCCACAGAGTCAAAGTCAATGTATAAATTCCATTCCCCCAAACAACTTTCAGTCTCACAATTTCAGTAATTCCAGTTTTCCCTCACATGAAATTGAGGCACAAGAGAACAAAAACATGCTACCTCCTACACGGTTTCCCCATAGTGCTGCCCCTGAAAGTCAACAGAGAAATTCTGGTATGCACAATCATATTAACATGCAATTTAACAACCCGCAACATATGTCCCAGAAATTATGCAAAAATGATCAAGACCAGATACTATCCCCAAGCTTCCTTTCCCAGCTACCACCTACTGAAACTCATCAGCAAGCCACCAGCACATTTTCCAATCAGCTCCCTCAGGATAGGCAGAATATGCAAGCATCTCCACTATCACGAGATGCTTCCCGTAGTCAAGAAGTTGAGCCACTCCTAAAAAAGCTTAAAACAGAGGACTACCTTCATTCAGAATTCCAGATGTTACCTGCATGTATCAAAACACCAGCACAAGTTCAAATTTCAAGTAAGGCTATAAGAGAAAACTTTGGATTTCAAGACTCATCCAAGTCAAACACACCATCCTTGTTTAAAGAAGTAGAAGCTCTAACAGAAAGGAAACTCCAGCAGAACACAGAGTGCTCACAGAACATTAGTACAGGACAACAAATCTACCAGCAACCTCTCCAACATAGGATATACAATCATTCAGAATTCTCACAGTCACTGATTTCTCAATCACAACATTCACAAGCTTCTGATGGTCTTCAGATACCTGTTCGGACATTGACCAAAGCTGAATTCCATGAGTCCTTTGCCCAAATCCAGAGAGAGTCTCTCTCAAGCAATGGTGCTCAAATGGATGTTCAGAGGCATGCAGCTTTGCGAATGCACCTTCTG/- CAGAGGCAGGAACGGCAAAGCCCCAACAACATTAGACAAATGATGCCAGCCATAAAAAGTGAAAACTGCTCAGGTTTTGA ... - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None