Genomic Feature

as53

ID
ZDB-ALT-190423-5
Name
as53
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Chen-Hui Chen Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 8: 17084455 - 17085796 (GRCz11) (1) Details
Nucleotide change
GTGCTGTGGCACATGTCACCATCCTCAAGTACTTCGCCCACTACATGGAGGAGAATTTGATGGATGTGAGTGCACTCTTAGTCTTAACCCTTATGCTTGTATTCACATTTAAAGTCAGAAGATTTGATTTTATATTCTGGTTTGCATTACAAGAAGTTCTAATGTATGCAATTTATTTTTATTTGATGCAGGGAGGTGATGTGATAAGTGAACCAGATATTCAGAAGACAAGAATATACCTGCTGCAGTGGCTGAAATCAGACAGAGCTTTACTGATGCTTTTCAACGATGGCACATTTCAGGTAAAATTATGACCCTTATTTTCTTAAAAAAACAGCTCTTAATGGGACAGTTCATCCAAAAAGCTATTTGAAACATATGCAGAGTGATATTCAAGGCTCACGATGGTACATTGAGGACTTGAAACAATTGGTGTGTGCAAGAAACTGAACAATATTTATTGATTCAGATTCAAAAGTGTTAGATATTAGGTATAAAAAATAATAACATTTAACAAATAGTAATTTTTTTGCATTCTTTGATAAAAGCAGCATAAACATTGTACTTTTACTCACCCTCAAATCATTCCAAAACCTTTATGAGTTTCTTTATTCTATATACAAAGGAAAAAAGCTGAAAACAAGTAACCATTTACATCCATGGTAGGAAAAACAAATACTGTGGGAGTCAATGATTACAGGTTTTCATCTTACTTTTAAGTATCTTCTTTAGTGGTTGGAAAGAAATGCAAACAGGTTTGGAACAAGTGATGAGTGAATAAATGATGACAGTATTTTCATTTCATGTGAACTGTCTCTTTAACGTCTATTTTGTGGTCAAAAATGACAATAGAAGTTTCATCTTTGGGTGAAAGCATTCCTTGAACACCGCAGTTAATGGCACTTGTGTAAACGTTGGTAGAACTCAATGTAAAAAGCTTCTGTCTAGTGCTCTCAACGCCCATCCGCAGTCATGAGTAGTTATCAGTCAGGTCTGCCTTTGTTCAGATTAAAAAGCTGTGTATCCTATAGCCCTGTGGGAAGAAGAAGGTCACATACTCTGCTGTAATAACATCCTGCATCCTGCGAGAGTGTTTCACGGCAGGAATAACAAAGCTCTTTTTCTTCCTCTCCCAACAGGTGAACTTTTATCACGACCACACCAAGCTCATCCTGTGCACGCAGCAGGATGAGTATCTGCTGACGTACATCAACGAGGAGAGAACGTCCGCTACCTTCCAGCTGAGCACGTTGCTGAGCGCGGGCTGCACTGCGGATCTGCGCAGTCGTCTCGAGTACGCACTCAACATGCTGCTGCAGCGATGCAACTGAGCCGGACAGAT/-
Variant Notes
the variant protein lack the C terminal POLO box domain.
plk2b-201, ENSDART00000023206.8, a deletion between exon 12 and exon 14, a 379  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1342 bp deleted (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
ATTACTGAAACATATTAGGAGGATATCTAAAGAATTATGTGACTCTGAAAGCTGATGTAATGATGTTAAAAATTCAGCTTTGCCCCTTTAGGAATGTTACATTTCTCGATATCATTATTTTACTGTGTTTTTGATCAAATCAATGCAGCCTTGGTGAGCATAAAAGAACGGTAGTCTACAGTATATTCAATATGATCATTATTATTCCCTCTGATTCCCTTTCCTAGCCTTCAGCGTAGATTCTTTATAATCTTAAGAAAGAAAATTGCACCAATATTCTGCAAATGTCAGCTGCAATGGCATTACAGATGAAAGATTGCAGAAGAGCAAGCATTAGTCATAGACCTCATATATGTGCTTACTGAAACAATCCATGAGCACTGTGTTGCTTTGAAAGTGCAGTTATTGATAATTCTCTTACTTTTTGTCTTTCAGGACTGTACATCAGTATGCTGCCCTCGGTCAGAAGTCTGTTTTCTCTGTTATTGAGGCTCCAGAGT
GTGCTGTGGCACATGTCACCATCCTCAAGTACTTCGCCCACTACATGGAGGAGAATTTGATGGATGTGAGTGCACTCTTAGTCTTAACCCTTATGCTTGTATTCACATTTAAAGTCAGAAGATTTGATTTTATATTCTGGTTTGCATTACAAGAAGTTCTAATGTATGCAATTTATTTTTATTTGATGCAGGGAGGTGATGTGATAAGTGAACCAGATATTCAGAAGACAAGAATATACCTGCTGCAGTGGCTGAAATCAGACAGAGCTTTACTGATGCTTTTCAACGATGGCACATTTCAGGTAAAATTATGACCCTTATTTTCTTAAAAAAACAGCTCTTAATGGGACAGTTCATCCAAAAAGCTATTTGAAACATATGCAGAGTGATATTCAAGGCTCACGATGGTACATTGAGGACTTGAAACAATTGGTGTGTGCAAGAAACTGAACAATATTTATTGATTCAGATTCAAAAGTGTTAGATATTAGGTATAAAAAATAATAACATTTAACAAATAGTAATTTTTTTGCATTCTTTGATAAAAGCAGCATAAACATTGTACTTTTACTCACCCTCAAATCATTCCAAAACCTTTATGAGTTTCTTTATTCTATATACAAAGGAAAAAAGCTGAAAACAAGTAACCATTTACATCCATGGTAGGAAAAACAAATACTGTGGGAGTCAATGATTACAGGTTTTCATCTTACTTTTAAGTATCTTCTTTAGTGGTTGGAAAGAAATGCAAACAGGTTTGGAACAAGTGATGAGTGAATAAATGATGACAGTATTTTCATTTCATGTGAACTGTCTCTTTAACGTCTATTTTGTGGTCAAAAATGACAATAGAAGTTTCATCTTTGGGTGAAAGCATTCCTTGAACACCGCAGTTAATGGCACTTGTGTAAACGTTGGTAGAACTCAATGTAAAAAGCTTCTGTCTAGTGCTCTCAACGCCCATCCGCAGTCATGAGTAGTTATCAGTCAGGTCTGCCTTTGTTCAGATTAAAAAGCTGTGTATCCTATAGCCCTGTGGGAAGAAGAAGGTCACATACTCTGCTGTAATAACATCCTGCATCCTGCGAGAGTGTTTCACGGCAGGAATAACAAAGCTCTTTTTCTTCCTCTCCCAACAGGTGAACTTTTATCACGACCACACCAAGCTCATCCTGTGCACGCAGCAGGATGAGTATCTGCTGACGTACATCAACGAGGAGAGAACGTCCGCTACCTTCCAGCTGAGCACGTTGCTGAGCGCGGGCTGCACTGCGGATCTGCGCAGTCGTCTCGAGTACGCACTCAACATGCTGCTGCAGCGATGCAACTGAGCCGGACAGAT/- GAGGAGAACAGTTGGCCACTGACTCAGCACGAGCTGACGATGTCTTTCAATGCAAGGGCAATGAGGAGGGAATGTGGACC  ...
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations