Genomic Feature
sd52
- ID
- ZDB-ALT-170913-3
- Name
- sd52
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Yury Miller Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 3: 19310031 - 19310040 (GRCz11) (1) Details
- Nucleotide change
- CACGGCAGTC/-
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 10 bp deleted in Exon 5 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
ATATTAATAAATGTTCTCTTTGATCCCCTTACATAAGTACATAAGTTTTATTTATATCTATAACATGTTATCGTTATGGGACGTCTTGTAAGAAAGCACATTAAAAAGAAGGTATTCATGCTTCTTATGTTGCACTTTTTGCTTCTGTGTGAACAAAATGTGTACTCAAGCAGCCCCAAGAAGTGCATTTGAATGCATGATGATACCAGATGAAAACAGTACAAGTTCTAAATGCATAATGCATGCAGAATGTATATCTGATATTTAATGTACAAAAAGTAGGAGCAGGATTTTGGGCCAATGAGATTTTACAGTGTGTGGAGAAATAACAAAGTAAACAATAAAATGCTTATTAATACATTTGTCTTCCCACATAACTTAAAAGCATCAGGCAAGTCATTTTTCATTAAGAGATAATAAACTATTTTGCTTTTTCCATATGAACAGCCTTGCCAACATGCCGTCCAGATGAGTTCCAGTGTGGTGATGGGTCTTGCATC
CACGGCAGTC/- GGCAGTGCAACCACGTTTATGACTGCAAAGACATGAGCGATGAGCTGGGCTGCGTCAATGGTGAACCAGACAGATATGATAGTCAAAACATACGCTTTATGTCTTTTCCTGATATGCGTTACTAAAATTTCTCTTCTCCCGATTTTCAGCAACTCACTGTGAGCCACCATACAGGTTTAAGTGCCGCAGCGGTGAATGCATAAGCATGGAAAAGGTTTGCAACAAGCAACGGGACTGCAGGGATTGGTCTGATGAGCCGCTACGAGAATGTGGTAAGTACCAGGGAAACCGAGTCGGTAGTTGGTCTACATACCCTTACAAAAACAAACCATGGTTTTACTATAGTGAAACTGTAGTCCATATGACTGTAGTAACAATGTTTTTTTGGTGCGTACTGTGGTTTTGAGACCATCGTTTTTAATATTGTACTGTATAATATTGTCAAATAATGATGCATAAAATGAAGCATAGTTTTACTATGGTGGATTTAACTGAATTAT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None