ZFIN Publication List

ZFIN ID: ZDB-ATB-110203-1

CITATIONS (72 total)

Antibody Name: Ab5-casp3

Annus, T., Müller, D., Jezsó, B., Ullaga, G., Németh, B., Harami, G.M., Orbán, L., Kovács, M., Varga, M. (2022) Bloom syndrome helicase contributes to germ line development and longevity in zebrafish. Cell Death & Disease. 13:363

Barbereau, C., Yehya, A., Silhol, M., Cubedo, N., Verdier, J.M., Maurice, T., Rossel, M. (2020) Neuroprotective Brain-Derived Neurotrophic Factor signaling in the TAU-P301L tauopathy zebrafish model. Pharmacological research. 158:104865

Basti, A., Fior, R., Yalҫin, M., Póvoa, V., Astaburuaga, R., Li, Y., Naderi, J., Godinho Ferreira, M., Relógio, A. (2020) The Core-Clock Gene NR1D1 Impacts Cell Motility In Vitro and Invasiveness in A Zebrafish Xenograft Colon Cancer Model. Cancers. 12(4):

Berlingerio, S.P., He, J., De Groef, L., Taeter, H., Norton, T., Baatsen, P., Cairoli, S., Goffredo, B., de Witte, P., van den Heuvel, L., Baelde, H.J., Levtchenko, E. (2021) Renal and Extra Renal Manifestations in Adult Zebrafish Model of Cystinosis. International Journal of Molecular Sciences. 22(17):

Bhumika, S., Lemmens, K., Vancamp, P., Moons, L., Darras, V.M. (2015) Decreased thyroid hormone signaling accelerates the reinnervation of the optic tectum following optic nerve crush in adult zebrafish. Molecular and cellular neurosciences. 68:92-102

Bosco, A., Bureau, C., Affaticati, P., Gaspar, P., Bally-Cuif, L., and Lillesaar, C. (2013) Development of hypothalamic serotoninergic neurons requires Fgf signalling via the ETS-domain transcription factor Etv5b. Development (Cambridge, England). 140(2):372-384

Bresciani, E., Confalonieri, S., Cermenati, S., Cimbro, S., Foglia, E., Beltrame, M., Di Fiore, P.P., and Cotelli, F. (2010) Zebrafish numb and numblike are involved in primitive erythrocyte differentiation. PLoS One. 5(12):e14296

Brown, S.J., Boussaad, I., Jarazo, J., Fitzgerald, J.C., Antony, P., Keatinge, M., Blechman, J., Schwamborn, J.C., Krüger, R., Placzek, M., Bandmann, O. (2021) PINK1 deficiency impairs adult neurogenesis of dopaminergic neurons. Scientific Reports. 11:6617

Budine, T.E., de Sena-Tomás, C., Williams, M.L.K., Sepich, D.S., Targoff, K.L., Solnica-Kreze, L. (2020) Gon4l/Udu Regulates Cardiomyocyte Proliferation and Maintenance of Ventricular Chamber Identity During Zebrafish Development. Developmental Biology. 462(2):223-234

Burczyk, M.S., Burkhalter, M.D., Tena, T.C., Grisanti, L.A., Kauk, M., Matysik, S., Donow, C., Kustermann, M., Rothe, M., Cui, Y., Raad, F., Laue, S., Moretti, A., Zimmermann, W.H., Wess, J., Kühl, M., Hoffmann, C., Tilley, D.G., Philipp, M. (2019) Muscarinic receptors promote pacemaker fate at the expense of secondary conduction system tissue in zebrafish. JCI insight. 4(20):

Chen, Y., Zhu, W., Shu, F., Fan, Y., Yang, N., Wu, T., Ji, L., Xie, W., Bade, R., Jiang, S., Liu, X., Shao, G., Wu, G., Jia, X. (2020) Nd₂O₃ Nanoparticles Induce Toxicity and Cardiac/Cerebrovascular Abnormality in Zebrafish Embryos via the Apoptosis Pathway. International Journal of Nanomedicine. 15:387-400

Cheng, F., De Luca, A., Hogan, A.L., Rayner, S.L., Davidson, J.M., Watchon, M., Stevens, C.H., Muñoz, S.S., Ooi, L., Yerbury, J.J., Don, E.K., Fifita, J.A., Villalva, M.D., Suddull, H., Chapman, T.R., Hedl, T.J., Walker, A.K., Yang, S., Morsch, M., Shi, B., Blair, I.P., Laird, A.S., Chung, R.S., Lee, A. (2021) Unbiased Label-Free Quantitative Proteomics of Cells Expressing Amyotrophic Lateral Sclerosis (ALS) Mutations in CCNF Reveals Activation of the Apoptosis Pathway: A Workflow to Screen Pathogenic Gene Mutations. Frontiers in molecular neuroscience. 14:627740

Chia, J.S.M., Wall, E.S., Wee, C.L., Rowland, T.A.J., Cheng, R.K., Cheow, K., Guillemin, K., Jesuthasan, S. (2019) Bacteria evoke alarm behaviour in zebrafish. Nature communications. 10:3831

Choi, S.Y., Baek, J.I., Zuo, X., Kim, S.H., Dunaief, J.L., Lipschutz, J.H. (2015) Cdc42 and sec10 Are Required for Normal Retinal Development in Zebrafish. Investigative ophthalmology & visual science. 56:3361-3370

Chrystal, P.W., Lambacher, N.J., Doucette, L.P., Bellingham, J., Schiff, E.R., Noel, N.C.L., Li, C., Tsiropoulou, S., Casey, G.A., Zhai, Y., Nadolski, N.J., Majumder, M.H., Tagoe, J., D'Esposito, F., Cordeiro, M.F., Downes, S., Clayton-Smith, J., Ellingford, J., Genomics England Research Consortium, Mahroo, O.A., Hocking, J.C., Cheetham, M.E., Webster, A.R., Jansen, G., Blacque, O.E., Allison, W.T., Au, P.Y.B., MacDonald, I.M., Arno, G., Leroux, M.R. (2022) The inner junction protein CFAP20 functions in motile and non-motile cilia and is critical for vision. Nature communications. 13:6595

Crouzier, L., Denus, M., Richard, E.M., Tavernier, A., Diez, C., Cubedo, N., Maurice, T., Delprat, B. (2021) Sigma-1 Receptor Is Critical for Mitochondrial Activity and Unfolded Protein Response in Larval Zebrafish. International Journal of Molecular Sciences. 22(20):

Crouzier, L., Diez, C., Richard, E.M., Cubedo, N., Barbereau, C., Rossel, M., Delaunay, T., Maurice, T., Delprat, B. (2021) Loss of Pde6a Induces Rod Outer Segment Shrinkage and Visual Alterations in pde6a^Q70X Mutant Zebrafish, a Relevant Model of Retinal Dystrophy. Frontiers in cell and developmental biology. 9:675517

Cruz-Duarte, R., de Almeida, C.R., Negrão, M., Fernandes, A., Borralho, P., Sobral, D., Gallego-Paez, L.M., Machado, D., Gramaça, J., Vílchez, J., Xavier, A.T., Godinho Ferreira, M., Miranda, A.R., Mansinho, H., Brito, M.J., Pacheco, T.R., Abreu, C., Lucia-Costa, A., Mansinho, A., Fior, R., Costa, L., Martins, M. (2022) Predictive and therapeutic implications of a novel PLCγ1/SHP2-driven mechanism of cetuximab resistance in metastatic colorectal cancer. Clinical cancer research : an official journal of the American Association for Cancer Research. 28(6):1203-1216

Elmonem, M.A., Khalil, R., Khodaparast, L., Khodaparast, L., Arcolino, F.O., Morgan, J., Pastore, A., Tylzanowski, P., Ny, A., Lowe, M., de Witte, P.A., Baelde, H.J., van den Heuvel, L.P., Levtchenko, E. (2017) Cystinosis (ctns) zebrafish mutant shows pronephric glomerular and tubular dysfunction. Scientific Reports. 7:42583

Fillatre, J., Fauny, J.D., Fels, J.A., Li, C., Goll, M., Thisse, C., Thisse, B. (2019) TEADs, Yap, Taz, Vgll4s transcription factors control the establishment of Left-Right asymmetry in Zebrafish. eLIFE. 8:

Gerety, S.S., and Wilkinson, D.G. (2011) Morpholino artifacts provide pitfalls and reveal a novel role for pro-apoptotic genes in hindbrain boundary development. Developmental Biology. 350(2):279-289

Gerety, S.S., Breau, M.A., Sasai, N., Xu, Q., Briscoe, J., and Wilkinson, D.G. (2013) An inducible transgene expression system for zebrafish and chick. Development (Cambridge, England). 140(10):2235-2243

Hachimi, M., Grabowski, C., Campanario, S., Herranz, G., Baonza, G., Serrador, J.M., Gomez-Lopez, S., Barea, M.D., Bosch-Fortea, M., Gilmour, D., Bagnat, M., Rodriguez-Fraticelli, A.E., Martin-Belmonte, F. (2020) Smoothelin-like 2 Inhibits Coronin-1B to Stabilize the Apical Actin Cortex during Epithelial Morphogenesis. Current biology : CB. 31(4):696-706.e9

Hale, A.J., Kiai, A., Sikkens, J., den Hertog, J. (2017) Impaired caudal fin-fold regeneration in zebrafish deficient for the tumor suppressor Pten. Regeneration (Oxford, England). 4:217-226

Hall, Z.J., Tropepe, V. (2018) Visual experience facilitates BDNF-dependent adaptive recruitment of new neurons in the postembryonic optic tectum. The Journal of neuroscience : the official journal of the Society for Neuroscience. 38(8):2000-2014

Hall, Z.J., Tropepe, V. (2018) Movement maintains forebrain neurogenesis via peripheral neural feedback in larval zebrafish. eLIFE. 7

Han, R., Zhao, Q., Zong, S., Miao, S., Song, W., Wang, L. (2016) A novel TRIM family member, trim69, regulates zebrafish development through p53-mediated apoptosis. Molecular reproduction and development. 83(5):442-54

He, M., Jiao, S., Zhang, R., Ye, D., Wang, H., Sun, Y. (2022) Translational control by maternal Nanog promotes oogenesis and early embryonic development. Development (Cambridge, England). 149(24):

He, S., Zimmerman, M.W., Layden, H.M., Berezovskaya, A., Etchin, J., Martel, M.W., Thurston, G., Jing, C.B., van Rooijen, E., Kaufman, C.K., Rodig, S.J., Zon, L.I., Patton, E.E., Mansour, M.R., Look, A.T. (2021) Synergistic melanoma cell death mediated by inhibition of both MCL1 and BCL2 in high-risk tumors driven by NF1/PTEN loss. Oncogene. 40(38):5718-5729

He, Y., Lu, X., Qian, F., Liu, D., Chai, R., Li, H. (2017) Insm1a Is Required for Zebrafish Posterior Lateral Line Development.. Frontiers in molecular neuroscience. 10:241

Ibrahim, S., Harris-Kawano, A., Haider, I., Mirmira, R.G., Sims, E.K., Anderson, R.M. (2020) A Novel Cre-Enabled Tetracycline Inducible transgenic system for tissue specific cytokine expression in the zebrafish: CETI-PIC3. Disease models & mechanisms. 13(6):

Ikeda, T., Inamori, K., Kawanishi, T., Takeda, H. (2022) Reemployment of Kupffer's vesicle cells into axial and paraxial mesoderm via transdifferentiation. Development, growth & differentiation. 64(3):163-177

Itoh, T., Inoue, S., Sun, X., Kusuda, R., Hibi, M., Shimizu, T. (2021) Cfdp1 controls the cell cycle and neural differentiation in the zebrafish cerebellum and retina. Developmental Dynamics : an official publication of the American Association of Anatomists. 250(11):1618-1633

Jensen, L.D., Nakamura, M., Bräutigam, L., Li, X., Liu, Y., Samani, N.J., Cao, Y. (2015) VEGF-B-Neuropilin-1 signaling is spatiotemporally indispensable for vascular and neuronal development in zebrafish. Proceedings of the National Academy of Sciences of the United States of America. 112(44):E5944-53

Jimenez, E., Slevin, C.C., Colón-Cruz, L., Burgess, S.M. (2021) Vestibular and Auditory Hair Cell Regeneration Following Targeted Ablation of Hair Cells With Diphtheria Toxin in Zebrafish. Frontiers in Cellular Neuroscience. 15:721950

Ju, B., Chen, W., Spitsbergen, J.M., Lu, J., Vogel, P., Peters, J.L., Wang, Y.D., Orr, B.A., Wu, J., Henson, H.E., Jia, S., Parupalli, C., Taylor, M.R. (2014) Activation of Sonic hedgehog signaling in neural progenitor cells promotes glioma development in the zebrafish optic pathway. Oncogenesis. 3:e96

Kasica, N., Podlasz, P., Sundvik, M., Tamas, A., Reglodi, D., Kaleczyc, J. (2016) Protective Effects of Pituitary Adenylate Cyclase-Activating Polypeptide (PACAP) Against Oxidative Stress in Zebrafish Hair Cells. Neurotoxicity research. 30(4):633-647

Katz, S., Cussigh, D., Urbán, N., Blomfield, I., Guillemot, F., Bally-Cuif, L., Coolen, M. (2016) A Nuclear Role for miR-9 and Argonaute Proteins in Balancing Quiescent and Activated Neural Stem Cell States. Cell Reports. 17:1383-1398

Kulkarni, A., Ibrahim, S., Haider, I., Basha, A., Montgomery, E., Ermis, E., Mirmira, R.G., Anderson, R.M. (2022) A Novel 2-Hit Zebrafish Model to Study Early Pathogenesis of Non-Alcoholic Fatty Liver Disease. Biomedicines. 10(2):

Kulkarni, A.A., Conteh, A.M., Sorrell, C.A., Mirmira, A., Tersey, S.A., Mirmira, R.G., Linnemann, A.K., Anderson, R.M. (2018) An In Vivo Zebrafish Model for Interrogating ROS-Mediated Pancreatic β-Cell Injury, Response, and Prevention.. Oxidative medicine and cellular longevity. 2018:1324739

Leerberg, D.M., Sano, K., Draper, B.W. (2017) Fibroblast growth factor signaling is required for early somatic gonad development in zebrafish. PLoS Genetics. 13:e1006993

Lüffe, T.M., Bauer, M., Gioga, Z., Özbay, D., Romanos, M., Lillesaar, C., Drepper, C. (2022) Loss-of-Function Models of the Metabotropic Glutamate Receptor Genes Grm8a and Grm8b Display Distinct Behavioral Phenotypes in Zebrafish Larvae (Danio rerio). Frontiers in molecular neuroscience. 15:901309

Lüffe, T.M., D'Orazio, A., Bauer, M., Gioga, Z., Schoeffler, V., Lesch, K.P., Romanos, M., Drepper, C., Lillesaar, C. (2021) Increased locomotor activity via regulation of GABAergic signalling in foxp2 mutant zebrafish-implications for neurodevelopmental disorders. Translational psychiatry. 11:529

Ma, X., Zhu, P., Ding, Y., Zhang, H., Qiu, Q., Dvornikov, A.V., Wang, Z., Kim, M., Wang, Y., Lowerison, M., Yu, Y., Norton, N., Herrmann, J., Ekker, S.C., Hsiai, T.K., Lin, X., Xu, X. (2020) Retinoid X receptor alpha is a spatiotemporally predominant therapeutic target for anthracycline-induced cardiotoxicity. Science advances. 6:eaay2939

Maselli, K.M., Gee, K., Isani, M., Fode, A., Schall, K.A., Grikscheit, T.C. (2020) Broad spectrum antibiotics alter the microbiome, increase intestinal fxr, and decrease hepatic steatosis in zebrafish short bowel syndrome. American journal of physiology. Gastrointestinal and liver physiology. 319(2):G212-G226

Mo, W., and Nicolson, T. (2011) Both pre- and postsynaptic activity of nsf prevents degeneration of hair-cell synapses. PLoS One. 6(11):e27146

Murphy, L.B., Santos-Ledo, A., Dhanaseelan, T., Eley, L., Burns, D., Henderson, D.J., Chaudhry, B. (2021) Exercise, programmed cell death and exhaustion of cardiomyocyte proliferation in aging zebrafish. Disease models & mechanisms. 14(7):

Muthu, V., Eachus, H., Ellis, P., Brown, S., Placzek, M. (2016) Rx3 and Shh direct anisotropic growth and specification in the zebrafish tuberal/anterior hypothalamus. Development (Cambridge, England). 143(14):2651-63

Mytlis, A., Kumar, V., Qiu, T., Deis, R., Hart, N., Levy, K., Masek, M., Shawahny, A., Ahmad, A., Eitan, H., Nather, F., Adar-Levor, S., Birnbaum, R.Y., Elia, N., Bachmann-Gagescu, R., Roy, S., Elkouby, Y.M. (2022) Control of meiotic chromosomal bouquet and germ cell morphogenesis by the zygotene cilium. Science (New York, N.Y.). 376(6599):eabh3104

Nagarajan, B., Harder, A., Japp, A., Häberlein, F., Mingardo, E., Kleinert, H., Yilmaz, Ö., Zoons, A., Rau, B., Christ, A., Kubitscheck, U., Eiberger, B., Sandhoff, R., Eckhardt, M., Hartmann, D., Odermatt, B. (2019) CNS myelin protein 36K regulates oligodendrocyte differentiation through Notch. Glia. 68(3):509-527

Olsen, J.B., Wong, L., Deimling, S., Miles, A., Guo, H., Li, Y., Zhang, Z., Greenblatt, J.F., Emili, A., Tropepe, V. (2016) G9a and ZNF644 Physically Associate to Suppress Progenitor Gene Expression during Neurogenesis. Stem Cell Reports. 7(3):454-70

Pan, Y.J., Tong, S.K., Hsu, C.W., Weng, J.H., Chung, B.C. (2022) Zebrafish Establish Female Germ Cell Identity by Advancing Cell Proliferation and Meiosis. Frontiers in cell and developmental biology. 10:866267

Paulus, J.D., Link, B.A. (2014) Loss of Optineurin In Vivo Results in Elevated Cell Death and Alters Axonal Trafficking Dynamics. PLoS One. 9:e109922

Poulain, M., and Ober, E.A. (2011) Interplay between Wnt2 and Wnt2bb controls multiple steps of early foregut-derived organ development. Development (Cambridge, England). 138(16):3557-68

Póvoa, V., Rebelo de Almeida, C., Maia-Gil, M., Sobral, D., Domingues, M., Martinez-Lopez, M., de Almeida Fuzeta, M., Silva, C., Grosso, A.R., Fior, R. (2021) Innate immune evasion revealed in a colorectal zebrafish xenograft model. Nature communications. 12:1156

Rothenaigner, I., Krecsmarik, M., Hayes, J.A., Bahn, B., Lepier, A., Fortin, G., Götz, M., Jagasia, R., and Bally-Cuif, L. (2011) Clonal analysis by distinct viral vectors identifies bona fide neural stem cells in the adult zebrafish telencephalon and characterizes their division properties and fate. Development (Cambridge, England). 138(8):1459-1469

Sharma, C., Kang, S.C. (2020) Garcinol pacifies acrylamide induced cognitive impairments, neuroinflammation and neuronal apoptosis by modulating GSK signaling and activation of pCREB by regulating cathepsin B in the brain of zebrafish larvae. Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association. 138:111246

Sheets, L. (2017) Excessive activation of ionotropic glutamate receptors induces apoptotic hair-cell death independent of afferent and efferent innervation. Scientific Reports. 7:41102

Silva, S., Cavaco, A., Basso, B., Mota, J., Cruz-Duarte, R., Costa, M., Carvalho, L., Lima, A., Costa, L., Ferreira, R., Martins, M. (2022) Therapeutic Potential of Deflamin against Colorectal Cancer Development and Progression. Cancers. 14(24):

Song, K.H., Woo, S.R., Chung, J.Y., Lee, H.J., Oh, S.J., Hong, S.O., Shim, J., Kim, Y.N., Rho, S.B., Hong, S.M., Cho, H., Hibi, M., Bae, D.J., Kim, S.Y., Kim, M.G., Kim, T.W., Bae, Y.K. (2017) REP1 inhibits FOXO3-mediated apoptosis to promote cancer cell survival. Cell Death & Disease. 8:e2536

Sousa, B.B., de Almeida, C.R., Barahona, A.F., Lopes, R., Martins-Logrado, A., Cavaco, M., Neves, V., Carvalho, L.A.R., Labão-Almeida, C., Coelho, A.R., Leal Bento, M., Lopes, R.M.R.M., Oliveira, B.L., Castanho, M.A.R.B., Neumeister, P., Deutsch, A., Vladimer, G.I., Krall, N., João, C., Corzana, F., Seixas, J.D., Fior, R., Bernardes, G.J.L. (2022) Selective Inhibition of Bruton's Tyrosine Kinase by a Designed Covalent Ligand Leads to Potent Therapeutic Efficacy in Blood Cancers Relative to Clinically Used Inhibitors. ACS pharmacology & translational science. 5:1156-1168

Stockdale, W.T., Lemieux, M.E., Killen, A.C., Zhao, J., Hu, Z., Riepsaame, J., Hamilton, N., Kudoh, T., Riley, P.R., van Aerle, R., Yamamoto, Y., Mommersteeg, M.T.M. (2018) Heart Regeneration in the Mexican Cavefish. Cell Reports. 25:1997-2007.e7

Takeuchi, Y., Narumi, R., Akiyama, R., Vitiello, E., Shirai, T., Tanimura, N., Kuromiya, K., Ishikawa, S., Kajita, M., Tada, M., Haraoka, Y., Akieda, Y., Ishitani, T., Fujioka, Y., Ohba, Y., Yamada, S., Hosokawa, Y., Toyama, Y., Matsui, T., Fujita, Y. (2020) Calcium Wave Promotes Cell Extrusion. Current biology : CB. 30(4):670-681.e6

Than-Trong, E., Kiani, B., Dray, N., Ortica, S., Simons, B., Rulands, S., Alunni, A., Bally-Cuif, L. (2020) Lineage hierarchies and stochasticity ensure the long-term maintenance of adult neural stem cells. Science advances. 6:eaaz5424

Turan, F., Yilmaz, Ö., Schünemann, L., Lindenberg, T.T., Kalanithy, J.C., Harder, A., Ahmadi, S., Duman, T., MacDonald, R.B., Winter, D., Liu, C., Odermatt, B. (2021) Effect of modulating glutamate signaling on myelinating oligodendrocytes and their development-A study in the zebrafish model. Journal of neuroscience research. 99(11):2774-2792

Varanda, A.B., Martins-Logrado, A., Ferreira, M.G., Fior, R. (2020) Zebrafish Xenografts Unveil Sensitivity to Olaparib beyond BRCA Status. Cancers. 12(7)

Webster, K.A., Henke, K., Ingalls, D.M., Nahrin, A., Harris, M.P., Siegfried, K.R. (2019) Cyclin-dependent kinase 21 is a novel regulator of proliferation and meiosis in the male germ line of zebrafish. Reproduction (Cambridge, England). 157(4):383-398

Webster, K.A., Schach, U., Ordaz, A., Steinfeld, J.S., Draper, B.W., Siegfried, K.R. (2017) Dmrt1 is necessary for male sexual development in zebrafish. Developmental Biology. 422(1):33-46

Wolf, E.J., Miles, A., Lee, E.S., Nabeel-Shah, S., Greenblatt, J.F., Palazzo, A.F., Tropepe, V., Emili, A. (2020) MKRN2 Physically Interacts with GLE1 to Regulate mRNA Export and Zebrafish Retinal Development. Cell Reports. 31:107693

Xu, B., Tang, X., Jin, M., Zhang, H., Du, L., Yu, S., He, J. (2020) Unifying Developmental Programs for Embryonic and Post-Embryonic Neurogenesis in the Zebrafish Retina. Development (Cambridge, England). 147(12):

Zhao, C., Zhai, Y., Geng, R., Wu, K., Song, W., Ai, N., Ge, W. (2022) Genetic analysis of activin/inhibin β subunits in zebrafish development and reproduction. PLoS Genetics. 18:e1010523e1010523

Additional Citations (1):

ZFIN Staff (2008) Antibody information from supplier. Manually curated data.