Gene

matn1

ID
ZDB-GENE-050307-3
Name
matrilin 1
Symbol
matn1 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 19 Mapping Details/Browsers
Description
Predicted to have calcium ion binding activity and extracellular matrix structural constituent. Involved in cartilage development. Predicted to localize to collagen-containing extracellular matrix and extracellular space. Is expressed in several structures, including cartilage element; head; integument; notochord; and pectoral fin. Orthologous to human MATN1 (matrilin 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
8 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
4 figures from Neacsu et al., 2014
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With matn1 Human Ortholog
No data available
Associated With matn1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000742 EGF-like domain
Domain IPR001881 EGF-like calcium-binding domain
Domain IPR002035 von Willebrand factor, type A
Domain IPR019466 Matrilin, coiled-coil trimerisation domain
Family IPR030751 Matrilin-1
Homologous_superfamily IPR036337 Matrilin, coiled-coil domain superfamily
Homologous_superfamily IPR036465 von Willebrand factor A-like domain superfamily
Domain Details Per Protein
Protein Length EGF-like calcium-binding domain EGF-like domain Matrilin-1 Matrilin, coiled-coil domain superfamily Matrilin, coiled-coil trimerisation domain von Willebrand factor A-like domain superfamily von Willebrand factor, type A
UniProtKB:Q5NJL4 320
UniProtKB:Q7ZVP3 507
UniProtKB:Q5NJK2 277
UniProtKB:A5WWJ5 277
UniProtKB:A5WWJ4 489
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-matn1 polyclonal Rabbit
1
Ab2-matn1 polyclonal Guinea pig
  • IHC
1
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations