ZFIN ID: ZDB-GENE-050307-3
Gene Name: matrilin 1
Gene Symbol: matn1    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity and extracellular matrix structural constituent. Involved in cartilage development. Predicted to localize to collagen-containing extracellular matrix and extracellular space. Is expressed in several structures, including cartilage element; head; integument; notochord; and pectoral fin. Orthologous to human MATN1 (matrilin 1).
Genome Resources: Alliance (1),  Gene:403023 (1),  Ensembl(GRCz11):ENSDARG00000030215 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la020858Tg Transgenic Insertion Unknown Unknown DNA
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-matn1 N/A 1
MO2-matn1 N/A 1
MO3-matn1 N/A 1
DISEASE ASSOCIATED WITH matn1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH matn1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cartilage development (more)
Cellular Component collagen-containing extracellular matrix (more)
Molecular Function calcium ion binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA matn1-201 (1)    Ensembl 2066
matn1-202 (1)    Ensembl 863
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES
Name Type Isotype Host Organism Assay Source Publications
Ab1-matn1 polyclonal Rabbit 1
Ab2-matn1 polyclonal Guinea pig IHC 1
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM matn1 No data available
MARKER RELATIONSHIPS
matn1 Contained in: [BAC] CH211-181O15 (1)
[Fosmid] CH1073-188M11 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001099740 (1) 1470 nt
Genomic GenBank:CU104776 (1) 106546 nt
Select Tool
Polypeptide UniProtKB:Q7ZVP3 (1) 507 aa
Sequence Information (all 19)
ORTHOLOGY for matn1 ( Chr: 19 )
CITATIONS (26)