Transcript

spata6l-208

ID

ZDB-TSCRIPT-141209-2413

Name

spata6l-208

Previous Names

spata6l-004

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

spata6l (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000062171 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000062171|OTTDARG00000042993|ZDB-GENE-040426-1369 spata6l|OTTDARP00000048592 spata6l-004 LG_none CU651672.6,CU672220.8 Danio rerio protein_coding KNOWN, 838 bp
ACACGATGCCAATGCCATGGAAACGCGACGCTTTTCCTGA
GCTGTCCATGTTATGGGTGAACTTGAGAAAATAACAGTTT
GTTAGCGGTAACAACGGGACACAACATGCCTCACAAAGCG
GTTAAAGTGATCGTTGAGCTCCACCTGAGGGCGATTACCT
GTCCAGGGGTTCATCTGCCCGCTAAAGATGATGTTTACCT
CAGTGTGAGTCTGATGAATCGGTACAGAAAGTCTGAATGT
CTTCCTGCAGTGTTTCCGATACTGATTCGCGAGAAAATCC
GCTTCGAAAAGTGTTTTATAAACTCTTTTTTGTAGATACT
GAATTATGCCACTGATCCTGAAGCCATAGCTGAATTTCTT
CAATATGAAGCAGTGAAAATTGAACTCATTCAGTTGATTC
CTCCAGCTGGAGAAATACTGGCTAGTTTTGAAGAAGATGC
TAGAAGTTTTCTTTTCCCAGAGCCCAAGCTGGTCCCGTCT
TTCTCTGGAGTGGAAAGAGAGGTGTTGATGACTCGACATC
CCACTTTCCCTGGTATCTCTCCAAGATTAGAGTTCTCCAC
GAAGACAACAATCAGTGAAATCTCCAGCGACAATGGCTTC
CTAACTCTTCCTGTGAGGAGAATGAGGAGGAAAACCTCTA
GAAAGTCCCGAAAACAGAGCAGCAGCTCATCCCTTAGACA
TCTCTCCTCTGCTCCATGCAGTCAAAGAAGAAACCACAAC
ACAGACCAGGATCAGAGATCTTCTGGTTATTCACCCGTCT
CTGCCAGAAAGCCCAGATTTAGAAGTCTGTCACCACATCG
ATCAAAACCATTGATAGATGCAGGTATGAACGCTGCAA

Related Transcripts

Transcripts related to spata6l

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	spata6l-206 (1) Ensembl	Havana	931 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
aberrant processed transcript	spata6l-208	Havana	838 nt
mRNA	spata6l-201 (1) Ensembl	Havana	1347 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	spata6l-203 (1) Ensembl	Havana	865 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	spata6l-204 (1) Ensembl	Havana	761 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	spata6l-005 (1) Ensembl	Havana	733 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	spata6l-007 (1) Ensembl	Havana	772 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	spata6l-008 (1) Ensembl	Havana	772 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations