ZFIN ID: ZDB-GENE-040426-1369
Gene Name: spermatogenesis associated 6-like
Gene Symbol: spata6l    Nomenclature History

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Previous Name: zgc:64105

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Orthologous to human SPATA6L (spermatogenesis associated 6 like).
Genome Resources: Alliance (1),  Gene:393384 (1),  Ensembl(GRCz11):ENSDARG00000004874 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:64105]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa16328 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41082 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH spata6l HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH spata6l VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process spermatogenesis (more)
    Cellular Component sperm connecting piece (more)
    Molecular Function myosin light chain binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Family IPR027208 Spermatogenesis associated 6-like protein
    Domain IPR032732 Spermatogenesis-associated protein 6, N-terminal
    Family IPR042769 SPATA6 family
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    aberrant processed transcript spata6l-206 (1)    Ensembl 931
    spata6l-208 (1)    Ensembl 838
    mRNA spata6l-201 (1)    Ensembl 1347
    spata6l-203 (1)    Ensembl 865
    spata6l-204 (1)    Ensembl 761
    ncRNA spata6l-005 (1)    Ensembl 733
    spata6l-007 (1)    Ensembl 772
    spata6l-008 (1)    Ensembl 772
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM spata6l No data available
    MARKER RELATIONSHIPS
    spata6l Contained in: [Fosmid] CH1073-394H18 (1), ZFOS-243H6 (1)
    spata6l Encodes: [cDNA] MGC:64105 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200412 (1) 1398 bp
    Genomic GenBank:CU672220 (1) 42846 bp
    Select Tool
    Polypeptide UniProtKB:F1QWX7 (1) 338 aa
    Sequence Information (all 17)
    ORTHOLOGY for spata6l ( Chr: 7 )
    CITATIONS (16)