Transcript

col12a1a-201

ID
ZDB-TSCRIPT-131113-2429
Name
col12a1a-201
Previous Names
  • col12a1-001
  • col12a1a-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Havana
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
OTTDART00000055846 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000055846|OTTDARG00000038947|ZDB-GENE-090728-1 col12a1a|OTTDARP00000043779 col12a1-001 LG_none CU929138.5,FP101905.4,CU855771.4,CU693377.32,CU694260.9 Danio rerio protein_coding KNOWN, 10560 bp
ATTTCGTCAGGGAGTAAAAGTTGGGAACAACCCCCTATTT
AGTGTCAGGTTGTGCTGAGAAACCTCCCATTCTCTCCTAG
GCTTTCCCTCAGTGCTGGAGCAGCGAGTCTGACTGCAGGA
CATCGGCTTTACATCTCTGAGACCCGCGCAGTTTTACAGA
TTAAGTAATGAGCTGCTGACTGTGTGTGTGTAAACATGAA
GATCAGGTTGTCTTTGGCCGCTGCTGCGCTCTTGACTCTA
GTACTCAGTTCAGTAGAGGCTCAAGTGGAGCCTCCGTCAG
ACTTAAAATTTAAAATCCTGAATGAAAACACAGTGCAAAT
GTCATGGAGGAAGCCCTCGTCTCAGATACAGGGCTACAGA
ATACAGGTCACGTCAGATACAGATGATTCTAAAGAATTGA
GTCTTCCTGCCTCGTCCACAAGCACATCAATTACAGATCT
AACTCCAGATGTAGACTATTCAGTGTCAATCAATTCATAT
GATGGTGCTGAAGAAAGTATCCCTATCCTTGGACAAATCA
CAATTCAATCCAGCAACACAAGTGGACCAAGGAGGCCACA
GTCAGAGGCTGTCAAGTGTTCAGTGAGTGCCGTTGCGGAT
CTGGTTTTCCTGGTGGACGGCTCTTGGAGTGTGGGAAGAG
AAAACTTTAGATTTATCCGGAGTTTCATTGGGGCCATGGC
CGGGGCCTTCGACATTGAAGAGGATAAGACCAGAGTGGCT
GTGGTTCAGTACAGCTCGGACACCAGGACAGAGTTCAGTC
TAAACACACATTTCAGACGACCCGATGTCCTGCGAGCCAT
TAAAAATCTGCCGTACAAGGGTGGAAATACCATGACGGGT
GATGCAATGGACTATCTGGTGAAAAACACGTTCACTCAGG
CGGCTGGAGCCAGGAAAGGCTTCCCAAAAGTGGCCATGAT
CATCACAGATGGAAAATCTCAAGACCCCGTAGAGGAGTAC
GCCGAACGGTTGAGGAACATCGGAGTGGAGATCTTTGTGC
TGGGTATCAAAGGAGCAGATGAGGACGAGCTGAAGGAGAT
CGCCTCCAGACCCCATAGCAAGCATGTCTATAACGTCCCC
AACTTCGACATGATCAATCAGGTCCAGAAGGCGCTCATCA
CTGAAGTTTGCTCTGGCGTGGAGGAGCAGCTAAATTCCCT
TGTAAGCGGGGAGGAAGTTGTCGAACCAGCTTCCAACCTC
AGAGTGACAGATATCTCCTCCAAATCCATGAGAATTGCGT
GGGATTCATCTCCTGGTGATATCACAGGCTATAAGCTGCA
GGTTTTTCCCACTATTGCGAGCGCCAAAAAGCAGGAGCTC
TACACTGGGCCCACGATGACCTTGGCCAATGTCAGAGACC
TGACGCCTGAGATGGAGTATGAGATCAGTCTGTTTGCTCT
CAAAGGTCTGACTCCTAGTGTGCCGCAAGTTGTCACTGAG
AAAACTCAGCCAGTGAAAGTATTTACAGAGTGTTCCCTAG
AGGTGGATGTCCAAGCTGACATTGTCCTCCTGGTGGATGG
GTCATATAGTATAGGACTGCCTAACTTTGCGAAGGTTAGA
GCTTTCCTCGAAGTACTTGTGAATTCTTTTGACATCGGAC
CTAACAAAGTGCAGATCAGCTTGGTTCAGTACAGCAGGGA
TCCTCACACTGAGTTCGCCTTGAATAAATTCGATGACAAT
GCAGCCATGGTCAAGGCGGTCCGCACCTTCCCCTACCGAG
GTGGATCCACCAACACCGGCAAGGCCATGACATATGTGAG
GGAAAAGATCTTTGTTTCGGGCCGTGGCGCTCGTGATAAC
GTCCCCCGAGTCATGGTGCTTATCACAGACGGCAAGTCCT
CAGATTCTTTCAAAGACCCCGCCAACAAACTGAGGGATAC
AGATGTGGAGATTTTTGCAGTGGGAGTAAAAGATGCCGTA
CGATCTGAGCTGGAGGCTATCGCCAATGTTCCTGCTGATA
ACCATGTGTTTGAGGTGGAGGACTTTGATGCTTTCGAGCG
GATCTCCAAGGAGCTGACCGCGTCCATCTGCCTCAGAATT
GAGCAGGAGCTCCATAACATCAGGAAAAGAAGTTTGCTTC
CCCCAAAGTCACTGAGCTTCTCTGAGGTGACCTCCAGGAG
TTTCAGGACCTCATGGGTTTCTGATGGAGAGGATATCCTG
TCTTTTCTGGTGCGCTTCAGGCCAGCGGCGGACCTAACTG
GAGACTACATCTCTCTGGTGGTTCCCCATGACATCACCAG
TACAATTCTGCCCAATCTCACGCCACTCACCACCTACGAA
GTTAACGTCATTGCTCAGTATGATAAAGGAGACAGCTTTC
CTTTGACGGGCGAGGAGACCACTTTAGAAGAGTTGGGTTC
TGTTCGTAACCTGATGGTGAGCGAGGAGGCTGTGGACCGC
TTTCGGGTGTCGTGGAGAGCTGCTCCAGGATTAGTGCTGA
GGTACAGACTGCTCTACGAGCCTGTGAGCGGAGGGGATAA
ACTGGAAGCAGAGACTGATGGGAATCAGGTCACCACTGTG
CTCAATGAACTACTACCGGTCACTACTTACCGGGTCACCG
TTTACCCTGAGTACGCAAGTGGAAGGGGTCCCTCCATGGA
CACTGAAGGCACCACCAAAGAAGTTCGAGGTTCTCCACGC
GACTTAAGGGTCTTCAATGAGACGGTGTCTAGCATGAGGG
TCTCGTGGCGGGCTGCCCCAGGCAACGTGCTTCAATATCA
GGTGGCCTACAAACCTGACGGTGGGGAGAGGAAAGAAATA
AGTGTTAAAGGAGAGACAACAACTGCTGTGCTGAAAAATC
TGCTGCCGGACACGGAGTATGAGCTGTTTGTTAGCGCACG
TTACGTCTCTGGACTTGGCGCACCACTTATGGGAACAGGC
ACCACGCTGGAAGAACTTGGTTCACCTTCGAATCTGGTAA
CTTCAGACGTCACTGAGAACAGTTTTGTAGCATCCTGGAC
CGCCGCCCCTGGAAACGTCCGTCTTTATCGGGTCACCTGG
AAATCCCTCTTTTCAGAGGAAGCTGGCGAGAAGACTGTCC
CCGGGGACGTAACCACCACTGTTCTGGACGGGCTGACACC
AGAGACCCGCTACAAGGTTTCTGTCTACGCTGTCTACAGC
CGTGCGGAGGGGGCGCCACTGCACGGAGAGGAGACCACAG
ATGTGTCGGCCGCTACCAGAGCTCTTACGGTGTCAGAAGA
AACAGAGAGGACCATGAAGGTGACATGGATACCAGCACCT
GGCAATGTTGTCAATTACAGGGTATCATACAAACCTCAGG
GTGATTTACGCCAAATGGCCTCCAAAGCACCAGGAGGCAC
CAATTCTATAGTCCTGAGACGCCTGATCCCCCAGACCACT
TACGATATCACAGTGGTTCCCGTCTACAAGTTTGGGGATG
GAAGACAAAGGCAAGGAGAAGGAACTACATTGTCTCAATA
TAAAGCTCCCAGAAACTTGCAAACTTCGGAGCCCACTAAA
ACCAGTTTCAGGGTGACCTGGGATCATGCTCCTGGAGATG
TAAAAGGCTACAAGGTCACTTTCCATCCCACCGGAAAGGA
AGTGGACCTGGGAGAGTTACTCGTAGGCCCCTATGACAAC
ACTGTGGTTCTGGAGGAACTAAGGGCCGGCACTAAGTATA
CGGTAAATGTGTTTGGTATGTTTGATGGAGGAGAGAGTAT
GCCATTGGCTGGAGAGGAGAAGACCACCCTCTCTGACGCA
GCTTCTGAAAACCTCCCTTATACACCTTCAGATGCCCAGT
GTAAAACCACGGCCCAAGCGGATATCGTCCTGCTTGTTGA
TGGATCTTGGAGCATTGGTCGCCTGAACTTCAAGACCATA
CGCAATTTCATTGCTCGCATGGTGGGAGTCTTCGACATCG
GCCCCGATCGTGTCCAGATTGGTCTGGCACAGTACAGCGG
AGACCCGAAGACTGAGTGGCATCTCAATGCTCACAGAACC
AGGACTCAGCTGCTGGATGCGGTGGCCAATCTACCCTACA
AAGGAGGAAACACTCTCACCGGCCTTGCTTTGAATTACAT
CCTTCAGAATAACTTCAAGCCTAACGTTGGCATGCGTCCA
AACTCCAGAAAGATCGGCGTCCTGGTCACTGATGGCAAGT
CCCAAGACGACATTGTGGCGAACTCACAGAACCTGCGGGA
CCAAGGGATTGAACTGTACGCCATTGGTGTAAAGAACGCA
GATGAGAATGAGTTGAGAACCATTGCTTCCGATCCCGATG
ACATTCACATGTACAACGTGGCTGATTTCTCCTTCCTGCT
GGACATTGTGGATGACCTCACAAACAACCTGTGCAACAGC
GTCAAAGGTCCAGGAGGAGGACCAGAGCCACCCACTGATC
TGACCACCTCAGAGGTCACACATTACTCTTTCCGTGCCAC
TTGGGTGGCTCCTGACGGGCCTGTGGAGAAGTACAGAGTG
GAGTATGTGAGCACCGCTGGAGGAGAACCACAGCAACAGA
TGTTTGTGGACGGGACGGTGACCACTGTGGTTTTGGAAGG
TCTCACTCCGCTGACCGAGTACATAGTAAAGGTTTACTCA
GTGGTGGGAGAGGACAGCAGCGACCCACTCAGAGGCATAG
AGACCACATTGCCTCTTCCTCCATCCGGTGAGTTGAGGAT
TACCGATGTGACCCACAGCACCATGCAGCTGGACTGGGAC
GCTGCGCCCGGCGCCGTCCGAAAGTACATCATCACTTACA
AGCCAGAGGAGGGAGAGGCGAAGGAGCTTGAAGTTGACGG
AGATGTAACATCTAGAGGCCTGGATAATCTCATCTCCCAG
ACTGAATATGATGTGGCTGTGACTCCGGTTTATGATTCGG
GCACTGGAAACCCCATGCTTAACCAGGCCATTACAGATGT
GGTTCCTGCCCCGCAGAACTTGAGGTTCTCGATGGTGACC
CAGACCAGTTTTAGGGTTCACTGGGAGCACGGCGCTCCTG
ATGTCTCCCTCTACCGTATTGGCTGGAAAAAGAAAGGAAC
GACCGAGTTTCAAAATGATATCCTGAGTAGTGAAGACACT
ACATATGATCTGGTGGACCTGGAGCCAGACACACCTTATG
ATGTTTCGGTCACTGCCATTTACCCTGATGAGTCTGAGAG
CGAGGATCTGCTGGGCACTGAACGCACTTTGGCCAAGCTT
GCTACACCACCTCCCAGTGGTCCTCCTCAAAACCTCCAGG
TGTTCGACGAGACCACCACCTCCCTCACGACTAAGTGGGA
CCACGCGCCTGGACGAGTTCAGAACTACAAAATCACCTAC
GTACCGCTTACTGGAGGACGATCACAGTCGACGCAGGTCG
GAGGAAAGAAAAACACAGTGATCCTGCAGAAACTGACTCC
AGACACTCCTTACTCCATCACTGTTGCTGCGGTCTACGCC
AGCGGAGAGGCCAGAGACATTTCTGGCCAAGGAAAGACAT
TGCCGCTGGGCAGTGTCAGGAATCTTCAGGTCACTGACCC
CACAGTTAGCACTCTGAATGTGCGCTGGGAGCCGGCGGAG
GGAAGCGTTCGCCAGTACAGGATCTACTACCAGCCCGTCG
CAGGGGGCGCAGAGGACATGGTCCAGGTTCCTGGAAGCAC
CACCAGCACCGTTCTGAAGAACCTGCAATCTGACACTCAG
TACAGAGTGACGGTGGTGCCAGTCTACGCTCCTGGAGAGG
GCAAGCGCATGTCGGAGACCGGAAAAACACTGGTTCGGAC
CCCTGCCAAGAACATCCAGGTTTACAACCCCACCACAAAC
ACCCTGAACGTGCGCTGGGAGCCGGCCTCAGGACAGGTGC
AGCAGTACCGCGTGGCTTACGCCCCTCTCTCCGGGATCCG
ACCCTCTCAGTCGGTGCTGGTTCCAGGAAACACCCACACG
GCTCTGCTGCAGCAGCTGGAATCAGACACTGACTACTCTG
TGAGTGTGGTGGCTCTGTATGCTGATGGAGAGGGCTCGTC
TGTGTCTGATAATGGCAAAACACTGCCCCGCAGTGGCCCC
AGGAACCTGCGGGTTTATGATCCCACCACCAGCACGCTGT
CGGTGGGCTGGGAACATGCAGAAGGGCCTGTGATTCAGTA
CCGCATTGGCTACGCACCCACCACTGGAGATCCCATTGAA
GAATTTACAACTGTCCCAGGCAACCGTAACTCGGTCATCC
TGCAAAACCTGCAGCCAGACACGCCGTACAACATCAACGT
AGAAGCCATTTATCAAGATGGCCCTGGAGGACGACTCAGT
GGAGATGGAAAAACATTGGATCTCCTTGGGCCTCGTAACC
TGCGTGTTTCAGACGAGTGGTACACACGTTTCCGAGTGTC
CTGGGATCCTGCAGCCGCACGGGTGAATGGATATAAACTG
GTCTATACACCAGTGGGCACAACCGACACCATGGAAGCCT
TCGTTGGAGACGTGACTTCACACCACCTGAACAACCTCCA
GCCTGGCACCACATACGACCTGAAGGTTTACGCTCAGTAT
GATGCGGGCTTGAGCGGCGCTCTGGTCGGACAGGGAACCA
CCCTGTATCTCAACGTGACCGACCTCACTTCCTACAACGT
GGGCTACGACTCTTTCTGCATCAGATGGACTCCTCATCGA
GCTGCCACCTCCTACAGACTCAAAGTCAACCCTTTCAACC
CATCTCACCGTGGAGCTCAGGAGGTCACGATCACTGCGGC
TGAGAGCCAGTACTGTTTTGACGGCCTGACGCCAGACGCG
CTATACAACGCCACCGTCTACACGCAGACCCCCAACCGAG
AGGGGCCCGGAGTCAGTGTCAAAGAGCGCACACTGGTGAA
GCCCACCGTCGCCCCAACACTACCTCCAACTCCTCCACCT
CCAGCCACCATTCCTTCTGCACTCGAGGTGTGCAAAGGTG
CCAAGGCTGACCTGGTGTTCCTGATCGATGGCTCGTGGAG
TATCGGAGATGACAGCTTCGCTAAAGTCCGGCAGTTTGTG
TTCAGCATGATTGGGGCGTTTGATGTGGTCAGCCATGAGG
GCATGCAGGTGTCTTTCGTGCAGTACAGCGACGACGCCAA
AACTGAGTTCAAGCTCAACACCTACCACGACAAGGGAATG
GTGCTGTCTGCTCTTCAGATGGTCAATTATAGAGGAGGAA
ACACCAAAACAGGTGCTGCACTGAAGCATGTTGGAGAAAA
AGTGTTCACCTCGGACAATGGCATGAGGAGAACCGTTCCC
AAGGTACTGGTTGTGGTGACCGATGGACGTTCTCAAGATG
ACGTGAAGAAGAGCGCTGCTAAACTACAGCATGCAGGTTA
CAGTGTGTTTGTGGTGGGTGTCGCTGACATTGACGTTAAT
GAACTGAGGAACATTGGAAGCAAGCCCAGTGACAGACACG
TCTTTATCGTCGACAACTTCGATGCTTTCGCCAAGATCCA
AGACAACCTGATCACGTTCATCTGTGAAACGGCAACGTCC
ACATGCCCTTTGATTTACCTCAATGGATTCACATCACCAG
GCTTCAGGATGCTGGAAGCTTTCAACATCACTGACAAGAC
CTACGCAGGCATGAACGGCGTCTCTCTGGAAACCGGCTCC
TTCAACAGCTTCATCGCATACAGACTCCATAAGGACGCCT
TCATTTCCCAGCCAACAAAGGAAATCCATCCAGATGGTCT
TCCTCCATCCTACACCCTCATCCTCCTCTTCCGTCTGCTC
CCGGACACCGGCAAGGATGCGTTTGATTTATGGCAGATCT
CAGATAAGAACAATAACCCTGAGGTCGGGCTCACCATTGA
CCCCTCCAGCAGAGTGATCTCCTTCTACAATAAAGACACT
AGAGGGGAAATTCAGAAAGTCTCCTTTGATAACGACCACG
TGAAGAAGATTTTCCACGGCAGTTTCCACAAGCTTCACAT
TTCTATTTCGCCGAAAAATGTCAAACTCAACATCGACTGC
CAAGAGGTGGCTGAGAAACAGATCAAAGCAGCCAACAACG
TCTCCACAGATGGCTACGAAGTCCTTGGAAAAATGACAAA
GTCTGGCGGTTCAAAGAAGCAGTCGGCCACATTCCAGCTC
CAGATGTTTGATATTGTCTGCAGTTTGGGCTGGACAAGTC
GAGACAAATGTTGTGATATTCCAGCAATGCGAGATGAAGC
CAAGTGTCCTGCTCTTCCTCACTCCTGCACATGTGCTCAG
GACAGTGTTGGTCCTCCAGGCCCAGCGGGTCCTCAAGGCA
GTCCTGGTACAAAAGGCCCACGAGGCGAGAGAGGAGAGTC
TGGTCCTACGGGTCCAATGGGTCCACGTGGAGAGCAGGGT
CTGCCAGGGCAGATGGGGCCACCGGGTCCACAGGGCCCCA
ATGGACTATCCCTTCCCGGAGAACCAGGGCGACCGGGACC
TAAGGGAGACCCCGGTGACTCAGGTTTACCTGGACAGAGA
GGCCCGGTTGGCGCTGCAGGTCCACTCGGCCCTGTTGGAC
CCGCTGGAGCAAGAGGTCCACCAGGAAGTGAAGGCCCATC
TGGACCAAGAGGTCCATCGGGACCAATGGGACCACCGGGA
GCTCCCGGAATGCCAGGAATCACCGGAAAACCAGGAAAAC
CCGGAGACACTGGCTTTCCTGGACCTGTTGGCATGAAAGG
AGAGAAGGGTGAAAGAGGAGACACTGCGTCACAGAATATG
ATGCGCTCTGTAGCGAGACAAGTCTGCGAACAGCTAGTCA
GCAGACAAATGAGCAGAATTGATATGATGATGAACCAGAT
CCCCAGCAACTACAGGAGTAACAGCCCCGGCCCCGCTGGA
CCTCCAGGCCCACCTGGAAACCAGGGACCCCATGGAGAGC
CTGGTCAGCCCGGACCCAATGGCTTCCCAGGAAATCCAGG
TTTACCAGGCTCTCCTGGAGAAAGAGGAGTGCCTGGAGAG
AAGGGTGAACGAGGCAGCCCCGGCATTGGCACTCGAGGAC
AGAGAGGATTACCTGGACCTCCTGGGCCACCAGGGCAGTC
TCAGACCGGTCCCCCTGGTCCCTCAGGCTCACCCGGGCCC
CGAGGACCACCAGGACAACATGGTTCTTCTGGAGTCACAG
GACCACCAGGACCTCCAGGATACTGTGACTCCTCTCAGTG
CGGCATGCCTTACAACGGACAAGGCTACCCAGGTTTTGCG
TAGTATGCTATCTAGACTGCCTGATCCTTTACACATCCCG
AGATTAGCACTCACTCTTGAGCTAATAAGGATAACCACCA
TGGATATGATTGCTGCACATTTGCTGACCAACTCTTTAAA
AATCGATCAATCAAACCAAAGGACTGGACTGCCACTAACA
CCAGCTGAGCGCTTCTATATCATACTGGAGCCAGTGATGG
TTGCATCTAGATGAGCGAGAGAGCTGAGGACGCATGTCAA
ACTACTAACAGCGGTAGATGGTGACATGACTGTACACAAA
ACTAATCGTGCCTTGTAAATGTTCTGGATGACCCAGTGGG
CTACAGTTAACGGCAGTCGTCACGCTTGTGCCTGATAACT
TGCTTCTCGCTGACGTTTCACGTTTATTCGTGGTTTCGGT
TTATATGTATAGGCAACGCTCAGGTTCAAAACGCAGTGTG
TGCCATTAGTATAGTCAACCATGAATTCTTATATATTTTT
TTGATTTATATATGTGTATAATACCTCACAAAGATCCAAT
TTGTTTGTTTATTTTAACGCGAGTGTGTTAGATTAGTAAT
AGTTTATTGACAAATCCAACGCAAAGTTGTTGACAACTTC
CGTATGGGTTTTGTGTTTGGTTAATATAGATGTTCTGTAT
TACTTTTTCGATAATTAACGCTAAAAATGAAAATGATTTG
TTAAAATGACGCACATGCTCAGCTGGCCAAATAATATTTC
CAAGCAGGCCCCTACCAGCCCGGGTCTGAAACCTACGTAG
TGCCCATACCAGCCGCGCCATCGGAAGATATCGAGACACA
GTCGCCAGGATTGCGCTACCAGCGCGGAAAAAGGTCGCTA
TCAAGAAAGGAAGCCGAAAGAATCAAAACATAAACGTGGA
AGTGTGTCCGTCAAAAACTGCAAGCCTCCTTCGTTTTGGT
CGATTGAGGAGGCTGTCGTACCAAACCTGTGTGTTCGCTG
ATGTTTGCTTGTAACATAACTGCATTTTTTGTATTTGTAA
GAATCTCATGTTCAGTACTAGGTCCTATAAACACTCATGA
ACTGATTCCTTGCACATATGAAAGTTTGCAAACGTGCTTC
TCTCTTTCTCGAGGAAAGCGGCTAAATCGGTTCGACTTCC
CTTTATTCTCCCTTTAGACCTGGCTTTTGTTATTCTAAAC
CCTATATTTACCTGTCGTATACCAGCTCACACCAAAAAAA
AAAGAGGAATTGCATGCCTGTGTTGTATATTTAGTAAGGA
CGTTTACCATCAGAATATAGTTGTTCGTTTCAGTGATATC
CCTTGAAATGCAGTTGGAATTCGTTGCAAGTCCTTCGACA
TAGAAGATCTTTTTTTGTTTCCATGTCTGAATTGCACAGT
GTGAATTCCACAGCCTTATTTTCTTATTTATTTCTGAATC
AGAAGAGGCATTTTTCAATAAAACTACTGAAAATGTTGAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations