Transcript

mark2a-207

ID

ZDB-TSCRIPT-091110-1721

Name

mark2a-207

Previous Names

mark2a-003
otpa-002
dkey-175m17.8-003
ottdart00000043519
si:dkey-175m17.8-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

mark2a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000043519 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000043519|OTTDARG00000031275|ZDB-GENE-030131-4145 mark2a|OTTDARP00000034502 DKEY-175M17.8-003 LG_ BX530031.5 Danio rerio protein_coding NOVEL, 854 bp
CAGGGCGACAGTAAGCACATAGGCAGTTCAGGCAGCTCCA
GCAAAGTCCCTCCTAGTCCTCTGATCTCTGGAGACCACAA
GAAAACACCCACCCCTTCCACTAACAGCATCCTGTCCTCA
GGCACAGGCCGCAGCAGGAACTCTCCAATCACTGAGAGAG
CCACTCTGGGAGTACAAAATGGCAAGGACAGCCTGCACAC
TCCAGGGTCCCGTGCCTCCACTGCCTCAGCGGCCGCAGTC
CTTGCCGCCTCATCCCGCACCCGACACCACAAGTCCTTGT
CCACATCCGCCCACCCCAGTCCCCCTGACCTCCATGCACA
TCGGCCCAGGCAACCAACCAGAGAGCCCCAGTGGTGTCGC
CCTCGGCTCAAAACATCAACATTTCCTCAATGGCCGACCG
TACCAACTTCTCCAGAGGGGTGACGAGCAGAAGCACTTTC
CACGCAGGCCAGCAGAGAGCCACTCGTGACCAGCAAGCGT
CAGCGTACAATGACCCCTCCGCCTCTCCCTCCCTTTCTCA
TGGCAACAGCCAGGTGCGCCGTCCCGGGACGGGCATCTTC
AGCAAGTTTACTTCCAAATTTGTACGCAGAAATCTCTCAT
TCAGATTTCCCAGAAGTCCGTATGAGGGAGAGGGTCGAGA
TGAGGCCAGCAGACCCATGTTGAGCACAGCAGACAAGATG
GAGAAAGGTACCCAGGGACACCCCAGCGACGAAAACAAGG
ACTCCTTTTCCTCCTCTTCTCCAGCGTCCAGCACACCCTC
CTCCACCCAGGCCTCCAAAGACACCAAGCCACGCTCCCTC
CGCTTCACCTGGAGCATGAAGACCACCTCCTCCATGGAGC
CCAATGAAATGATG

Related Transcripts

Transcripts related to mark2a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	mark2a-207	Havana	854 nt
mRNA	mark2a-201 (1) Ensembl	Ensembl	2280 nt	Select Tool ZFIN BLAST
mRNA	mark2a-203 (1) Ensembl	Havana	455 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	mark2a-204 (1) Ensembl	Havana	726 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	mark2a-205 (1) Ensembl	Havana	3084 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	mark2a-206 (1) Ensembl	Havana	419 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	mark2a-208 (1) Ensembl	Ensembl	2271 nt	Select Tool ZFIN BLAST
ncRNA	mark2a-006 (1) Ensembl	Havana	841 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations