Transcript

vipas39-201

ID

ZDB-TSCRIPT-090929-452

Name

vipas39-201

Previous Names

vipar-002
vipas39-002
si:ch211-20b12.1-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

vipas39 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000005163 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000005163|OTTDARG00000004803|ZDB-GENE-040520-1 vipas39|OTTDARP00000047693 vipas39-002 LG_ FQ377663.3 Danio rerio protein_coding KNOWN, 1938 bp
AGATGACACGAGCCAAACCTGAGGATGATGAGTACTGGAA
CAGCTCCAAATTCAAAGCCTTCACCTTCGATGATGAAGAC
GATGAGTTTTCACGGCTGAAAGAGTCCAAACGGGCAGTGA
ACAGCATCCTGGTGGATGATGATGATGATGAAGACGATGT
TGAGAAAGTGAGCTGGAGCGGGGAACCTGTGGGAAGCATC
TCTTGGTCAGTGAGGGAAACTGCCTCCAGTATCCGCTCTG
GGAGTGAGCAGAACTTTCCCAAAATCGATACCGCCCCTTC
ACTGTCCAAACAGGGCTCTGGATACTCCCTGAGCTCGCTG
TTTAAAGCCAAGAGCAAACCTACTGCTTTCCAGTCCTTCT
CCGAATCTTTTAGTGAAACATCTGCTAGAACATACGCACC
TGAGCTGAGGAAGCCCAAGTCTGATGGAAAGGATTTTGTG
AGTGACCTGAGTCCAGAGGAAACCATTAGGAGAATGCAGA
AAGGACGGGCTTTTTCTATGGAAAAGTTCCGCTCTCTGCA
GGACAAGCTTCTGCTGCTGGATGAAGCCGTTTCTGTTTAT
GATGGCAATGTCATCACTGCTGTGAGCTGCACATCACACT
CAATAACCCTATATGGAAAGACTGCTGTGGCTTTACAATG
ACTCATATTAGTAGGAACAGTGTTTTATTTATGTTGCTTA
ATCACTGATTATGTACATTTTCCTCCTGCAGGTCTTGATA
TATTTAAAAAAGTCATTAAGTAAAGAAATCCTCTTTCGAG
AGTTAATGCCGAGAGAAGTGGCTTTACGTCATTACATCCA
CTATTTGAAAGAGATGGGAGAGCAAAAGCTGTTGGTGGAG
TTACTGAAGGCTCTTGGCAGGACAGAAGATATGGCGTTAA
TGCAATACAAAGAGCACTTGAATATTAAGGATGAAGGCAG
AAGAAGAGACTTTCTCAAAAGTTGCCTCAGCCTTCCCTTT
TCTCAAGACGATTCCACTCATGTTCAAGATCACTATACCC
TCCTTGAAAGGCAAATAATCATTGAGGCTAGTGACAAGAA
GGCAGATACAGACATCTTTAAAAAGTTCCCCAGAAAAGCG
TCCATCCTTAATATGCCAATCATCACCACTCTGTATTACT
CCTGCTTCTACCATTACGGAGAGCCAGAGGGAACTTTTAG
CAGCCCTTCGAACATTAGAAAAACCTTCAGGATTTCAGAA
AAGCAGTACATTACCACAGCTCTTGGTGCGAGAGCAAAGT
TGAAATCGTGGTTTGATGTGGATAGTCTGTTTAACACCAA
GAACTGGCTGGGCTACACCAAAAAAAGATCTCCCATCGCC
TTTCACAGAGTGGTGGACATCCTGCAAAAGAACAGTGCCC
CTGTGCAGGTGCTGCAGGAGTATGTGAACCTCATCGATGA
CCCAGAACTCAAGCTCAGTGTGGCGCTCAAATATAAATGC
CATGACATCATCATCAATACATACAGAGACCTAAAGGATC
GACAGCAGCTGATAGTGTACAGAGAAAAGCTAGAGCGAGA
CTCACCTGAATACAGGAAGATTCAGGAACTCCTCAACAAC
GGGCAAATCAGATGGAAAAACTGACACAAGTCTTAAATGA
GGCAGTGGTTGAAAAGTATTGTGTCAAAACTCTCTCAGAG
ACGATATTACACACTATCAAGCTGCTCAATATGGAGACGG
TTTTAGGATTAAACCTGGACATCCTTCAGAAATTTCAAAG
AATCATCACGAGGAGTCATTCTGGAGTGATTCGTTCGCAA
GTGTGATTGAACTGCCAAGTGTCCTTCTGCCAACTCTACA
GGTGAACATTCATAATGAAACAAGGGAGGCTGTTGGTGGT
TACTTTCGTGATCAACATGAAATTCAGTTTTGTTTGCCCA
TGTGTACATTATTGAGCATTCCACATCATTTTTTATATTA
AATAATATAAAACACTGA

Related Transcripts

Transcripts related to vipas39

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	vipas39-201	Havana	1938 nt
mRNA	vipas39-202 (1) Ensembl	Havana	1867 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	vipas39-203 (1) Ensembl	Havana	704 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations