Gene

vipas39

ID
ZDB-GENE-040520-1
Name
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
Symbol
vipas39 Nomenclature History
Previous Names
  • vipar
  • si:ch211-20b12.1
  • wu:fb63f10 (1)
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Involved in hepaticobiliary system development. Predicted to localize to cytoplasm. Human ortholog(s) of this gene implicated in arthrogryposis, renal dysfunction, and cholestasis 2. Is expressed in intestine and liver. Orthologous to human VIPAS39 (VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Cullinane et al., 2010
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Cullinane et al., 2010
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With vipas39 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
arthrogryposis, renal dysfunction, and cholestasis 2 Alliance Arthrogryposis, renal dysfunction, and cholestasis 2 613404
Associated With vipas39 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR006925 Vps16, C-terminal
Family IPR040057 Spermatogenesis-defective protein 39
Domain Details Per Protein
Protein Length Spermatogenesis-defective protein 39 Vps16, C-terminal
UniProtKB:A0A0R4IQ05 234
UniProtKB:A0A0R4IF88 505
UniProtKB:A0A0R4IPY1 213
UniProtKB:Q5TYV4 483
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations