Transcript

ldb3a-211

ID

ZDB-TSCRIPT-090929-17908

Name

ldb3a-211

Previous Names

ldb3a-005

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

ldb3a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000037499 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000037499|OTTDARG00000027759|ZDB-GENE-040121-6 ldb3a|OTTDARP00000030053 ldb3-005 LG_ CT573135.6 Danio rerio protein_coding KNOWN, 1516 bp
ATGACTTCGTACAACGTGTCACTCTCTGGACCTCCACCTT
GGGGCTTCCGGTTGCAAGGAGGCAAGGACTTCAATATGCC
CCTCACCGTTTCTAGGATTACACCGGGGAGCAAGGCGGCC
TCCAGCAATCTGATCCAGGGGGATATCATCGTGGCCATTG
ATGGGGTCAGCACAGACGGGATGACACACCTGGAGGCCCA
AAACAAGATCAAGTCTGCCAACTTCAATCTGGCTCTCACC
ATGCAAAGGTCAAAGCGACCCACCCCAGTTCCAATTGCCA
CACCAAGAATTGAATCTCCGATGCCTGTGATTCCTCATCA
GAAGCTACAGCTTGCAGACCTCTATGGGCTACACTTCCCA
GTACAAAACCTCCATCTCAAGTTCTTACAGCCAGCCTCCG
CCTATGCAGCAGCCTCCGCTCATGCAGCAGCCTCCACTCA
TGCAGCAGCCTCCACTCATGCAGCAGCCTCCACCAATGCA
CCAGCATCCACCCATGCACCAACCTCCACCCATGCAGCAA
CCTCCACTTATGCAGCAGCCTCCACCCATGCAGCACAGCT
CCATCCAGATCCCTGTAGGTCCACCACCACCCAAAGTGGT
CAGCACAGCCACCATTATGCCTGCTTCCTACCCAGCTGGT
CCAGCACCAGCTCCTCCAATGGTGCACAAGCCTGCCCCAC
CTCCACCTGCTCCTCCAGCAGCTCCAGCATCGTCTTCCAA
CAGGCCTCCCTGGGTTACTGATGATAACTTTGCTCAGAAA
TTTGACCCCAGCAAACCCACCCCCAACACGAATATCAAAG
TGCAGCCTCTTCCCCAGGCGGCTCCACCACCACCATCTAT
TATCTCTAACCCGGTTCCTGCAGCACCAAGTCCTGCATTT
AACCCCGCCCCTCCTCCCTTCAACCCTGCCCCCTTCCCAC
CGGTGGCTCGTGGAGTTGCTCAAAGGGCGGAGCGGTTTGC
AGCTAGCAACAGGACACCTCTGTGTGCTACCTGCAACAAT
ATCATCAGGGGACCATTCCTGGTGGCATTGGGTCGTTCCT
GGCATCCAGAGGAGTTCAACTGCCATTACTGCCACACATC
TCTGGCTGATGTCAGTTTTGTGGAGGAGCAGAATAATGTT
TACTGTGAGAACTGCTATGAAGAGTTCTTCGCACCTACCT
GTGCCCGCTGCAGCACCAAGATCATGGGAGAAGTGATGCA
TGCACTGCGGCAGACCTGGCACACCACATGCTTTGTGTGT
GCGGCCTGTGGAAAGCCTTTTGGAAACAGCCTCTTCCATA
TGGAGGATGGTGAGCCGTACTGTGAGAAAGATTATATTGC
ACTCTTTAGTACAAAGTGCCATGGCTGTGACTTCCCTGTT
GAAGCAGGAGACAAATTTATCGAAGCTCTTGGCCACACAT
GGCACGATACCTGCTTTGTTTGTGCGGTCTGCCACGTCAA
CCTGGAAGGACAACCGTTCTACTCCAAGAAGGACAAGCCT
TTATGCAAGAAGCATGCACATGCCATCAATGTGTAG

Related Transcripts

Transcripts related to ldb3a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	ldb3a-211	Havana	1516 nt
mRNA	ldb3a-201 (1) Ensembl	Havana	852 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ldb3a-202 (1) Ensembl	Havana	780 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ldb3a-203 (1) Ensembl	Havana	900 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ldb3a-204 (1) Ensembl	Havana	1322 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ldb3a-205 (1) Ensembl	Havana	4619 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ldb3a-206 (1) Ensembl	Havana	1791 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ldb3a-208 (1) Ensembl	Havana	777 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ldb3a-209 (1) Ensembl	Havana	1767 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ldb3a-210 (1) Ensembl	Havana	791 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ldb3a-212 (1) Ensembl	Havana	2119 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ldb3a-213 (1) Ensembl	Havana	856 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ldb3a-214 (1) Ensembl	Havana	925 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ldb3a-215 (1) Ensembl	Havana	911 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ldb3a-216 (1) Ensembl	Havana	867 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ldb3a-217 (1) Ensembl	Havana	880 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations