Transcript

si:ch211-239e6.4-003

ID

ZDB-TSCRIPT-090929-1435

Previous Names

None

Transcript Type

ncRNA

Annotation Status

Withdrawn by Sanger

Annotation Method

Havana

Associated With Genes

cdpf1 (1)

Strain

Non Reference Strain

Genome Resources

Vega_Trans:OTTDART00000009258 (1)

RNA Central

None

Note

None

Sequence

OTTDART00000009258 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000009258|OTTDARG00000008128|ZDB-GENE-041210-170 si:ch211-239e6.4|no_translation CH211-239E6.4-003 LG_ BX649425.3 Danio rerio protein_coding NOVEL, 1352 bp
ACCGTAGCAGCAGCATGGCGTGAGCGGTCGTGCGCGTGCT
GGCTGCAGACAAACTTGCATCGTCTTGCAGACGGGAATGG
ATTTGACGGAAGGCTCCGCGCTCGGCGTGTTCAGCTGCCA
GCTGTGCGAGGTTTCCAGCCCATACAGCTTTTACGGACAG
AAGCCGCCGAACACCAGAGCTATAGTCTTTGTTCCACTGA
ATGAAGTCTGTAGATGGGGATCAACTTTGAATGTCTTCCT
GACATGGCATCCTCCTGAAGGCTGTCATTTGGGCCGAATA
TGCAAGTTGCTTTAGGAATTGATTTGGTGTTTTGTCAGTC
AACATTACCAAATACTGGCAAAAAAGACGTAACCATCAGT
TTGAATGCAGCTCCTGGTGCTGCATTGAAACTGAATAGGA
TGAGTATGCTTAATAGATGTTTGTTCAGAGGACTTGACAG
AGTAGGCCTGCTGAAGTGAATGACAACTTGATTGTTTTTG
GGATTGATGGCAATGAAAGCTTAATTTGAAGGTTCTCCAA
GTGTATTTTGATTTGATGCATCATGTGGTCATCTGGTATG
CACAAGTAATTTTGTCAATTGGCTTAATGTCCAAAAAAAT
CAGACTTCTTCTTGTTCCTCTTCTTCTTCTTCCTCCTTTT
TCTTCTTCCTCCTTCTTCCTCTTCTTCTTATGATGAATGT
TGCCACTACAACTAAAAAATTGTTAGCCATCATTGGTCAG
TTCTGCCATTTAACTTGTACTTTGTAACTGTGTTCTCTGC
TGTTATAAAAGGAGGTGTTTCCCACAATGAAGAAAATGAA
ATGGTTGGAAAGTGGTTGAAAGGTAATCAAGTTTTGTGGC
TGCTTCTGTTGACAAAGCACTGAACGCTCTTACATCCTAG
GGGTCCCTCTGGCAAAGCTGAGTATGAATCAGGCTCTTGG
AGGAATGTTTTGGCATAAAGGACCCCTTCAGCCCAGAGAG
AGAGAAGTTTCTGATTTTAGGATCCAAGTGCTCTCTGTGC
AGCAAGACTGTGTGTGTGGGAACGGACTGCAGTTTGTTCT
ACACCAAGCGCTTCTGCTTGCCTTGTGTGCGGGAGCACCT
CGATCAGTTTCCAGAGCAGGTTCAGAACGAGCTGCTGAGG
AAGAAGAGCGTCCAGAAGAGCACGTCCTCATGATAATTGA
TTTCATGTGATTATATTCATTTATGATCAGATCAATGAAA
TGAAAGTGTGAGTGATGATAAAGTTTGATTTTGTGGTTGT
GCTCGTATGAAGCAAGTTTGAGCAGCAGAGCATCTGTTGA
ATGTGACCGTTTATGGTGTTTACACAATATTTTGTAAGTG
ACAAGAGTGTTAAATAAATAGTGTGAAGAAGA

Related Transcripts

Transcripts related to cdpf1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	cdpf1-205 (1) Ensembl	Havana	724 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cdpf1-201 (1) Ensembl	Havana	882 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cdpf1-202 (1) Ensembl	Havana	775 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cdpf1-204 (1) Ensembl	Havana	842 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	si:ch211-239e6.4-002 (1) Ensembl	Havana	558 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations