Transcript

usf1-207

ID

ZDB-TSCRIPT-090929-12060

Name

usf1-207

Previous Names

usf1-002
zgc:56547-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

usf1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000029680 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000029680|OTTDARG00000022885|ZDB-GENE-040426-1072 usf1|OTTDARP00000024219 usf1-002 LG_ BX663520.9 Danio rerio protein_coding KNOWN, 1450 bp
GCAGTTAAGTACGTTTCCTCTGGCTGCGGCTACTGTTGTA
AACAAGACGCCTCGAGATCAGTAAACGTTCAGATTTTATA
AGACAACAAGAAGTGGTAACACAAATTTTACTTGTTACAT
ACTGACAGTGGAGATGAAAGGACAACCGAAAAGTTCTGAA
CCTGATGTCAGTGTTCCAGTCATTGAAGAAGGGGCAGTTG
CTACTGCAGAAGACCCATCAGCAATCACAACTATTCAATC
TGCTTCTACGTTTTCCACGGACCAGCCGATTAAATACCTT
TTCAAGACGGAGGGAGCTGGGGGGCAGGTTACATACCGAG
TAATCCAGGTTGCAGATGGACAGCTAGAGGCTCAACCTGA
TGGTACAACAGCTGTTAGTGTAGTGACTGGGTTTCCTGCC
ACAACACAGCCGGTTACGCAGGCTGTTTTCTCTCAGTCAG
AAGGCTTGGAGGGAGATGGCACAGAAACCCATTACACATA
TTATCCTGCTACTATCTCAGATGCTACTGCAGGCACAATG
GTGACAGGTGTTCAGGCCTCAGATGCTCTGCTCAGTCAGA
GTGCTTCTGCAGGTCAGTTGTATGTTATGATGTCCCCACA
GGAGGTCCTTACCGGAGCCAACCAGAGGTCTATTGCACCT
CGTACACAAGCTTACAATGCCAAATCGGAGGGTCCGAGAA
CTTCAAGAGATGAGAAAAGACGAGCTCAGCACAATGAAGT
TGAGCGAAGAAGAAGAGACAAAATCAATAACTGGATTGTT
CAGCTCTCAAAAACAATTCCAGACTGCACCATCGACTCCA
CTAAAACTGGACAGGCATAGTAAAGGTGGGATCCTATCAA
AGGCCTGTGATTACATTCAAGAGCTTCGACAAAGTAACAG
CCGGTTAGGAGATGAGCTGAACAGCATTGAGAGGTTGAGG
ATGGATAACCAGCTGTTACGACAAGAGGTTGAAGACTGGA
AATCTAAGAATCAGATATTGAGGAACCAGCTCCGGCAGCA
TGGCATAGTTGCAGCAGCAAGTGCAGATCCTCAGTAAAGA
ATTTGTCATTTGTTTTTATTTATCTTGAACAAGAGGACGC
GTGTAATGCAGTATTCAGTATATTGGTGATGATTCTTCAT
CAGGATCTTGCCTTATGTACATATTTCTTTTTCTTTCTTT
GTGCACCTCTTCATACTTTCATGTAATAAAGCATTCTTTT
TGTATGTGTCATGACAGGTCAGATGAATTTGTTGATTTTG
TACTTTTACATCTATTGTTTGTGGAATAATATGTTAACTT
TTTGAATGCATTTTCAAATATTTTGTACATTGAAAAGCGA
TTTTCAGTTTTGTCTGAATGGTAAGCATGTCAAATAACTG
CCTAATATTTAACAGTTCGCAACATGGTATGATATTATAG
TAGATTTCATTATGCAGATTGATGAAATAAATAGACGACT
TCAATTTCAA

Related Transcripts

Transcripts related to usf1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	usf1-207	Havana	1450 nt
mRNA	usf1-201 (1) Ensembl	Havana	1492 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	usf1-202 (1) Ensembl	Havana	710 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	usf1-203 (1) Ensembl	Havana	402 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	usf1-204 (1) Ensembl	Havana	931 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	usf1-205 (1) Ensembl	Havana	579 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	usf1-206 (1) Ensembl	Havana	832 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	usf1-208 (1) Ensembl	Havana	765 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	usf1-209 (1) Ensembl	Havana	805 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	usf1-210 (1) Ensembl	Havana	838 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations