Gene
usf1
- ID
- ZDB-GENE-040426-1072
- Name
- upstream transcription factor 1
- Symbol
- usf1 Nomenclature History
- Previous Names
-
- zgc:56547
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Description
- Predicted to have protein dimerization activity. Human ortholog(s) of this gene implicated in cardiovascular system disease and type 2 diabetes mellitus. Orthologous to human USF1 (upstream transcription factor 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:56547 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
---|---|---|---|
{Hyperlipidemia, familial combined, susceptibility to} | 602491 |
Domain, Family, and Site Summary
Domain Details Per Protein
Protein | Length | Helix-loop-helix DNA-binding domain superfamily | Myc-type, basic helix-loop-helix (bHLH) domain |
---|---|---|---|
UniProtKB:A0A0R4IXK2
|
299 | ||
UniProtKB:E9QEC7
|
213 | ||
UniProtKB:E9QBR1
|
266 | ||
UniProtKB:F1QQW3
|
230 | ||
UniProtKB:E9QFD0
|
224 | ||
UniProtKB:E9QBT6
|
237 | ||
UniProtKB:E9QHY9
|
90 | ||
UniProtKB:E9QFN2
|
205 | ||
UniProtKB:E9QIH8
|
228 | ||
UniProtKB:Q7ZWC6
|
309 | ||
UniProtKB:E9QDM4
|
156 | ||
UniProtKB:F1QUA1
|
309 |
Type | Name | Length (nt) | Analysis |
---|---|---|---|
aberrant processed transcript |
usf1-207
(1)
|
1450 nt | |
mRNA |
usf1-201
(1)
|
1492 nt | |
mRNA |
usf1-202
(1)
|
710 nt | |
mRNA |
usf1-203
(1)
|
402 nt | |
mRNA |
usf1-204
(1)
|
931 nt | |
mRNA |
usf1-205
(1)
|
579 nt | |
mRNA |
usf1-206
(1)
|
832 nt | |
mRNA |
usf1-208
(1)
|
765 nt | |
mRNA |
usf1-209
(1)
|
805 nt | |
mRNA |
usf1-210
(1)
|
838 nt |
Interactions and Pathways
No data available
Plasmids
No data available