PUBLICATION
The Zebrafish DVD Exchange Project: a bioinformatics initiative
- Authors
- Cooper, M.S., Sommers-Herivel, G., Poage, C.T., McCarthy, M.B., Crawford, B.D., and Phillips, C.
- ID
- ZDB-PUB-051107-30
- Date
- 2004
- Source
- The Zebrafish: Genetics, Genomics and Informatics, 2nd ed., Methods Cell Biol. 77: 439-457 (Chapter)
- Registered Authors
- Cooper, Mark S., Crawford, Bryan D., McCarthy, Mary, Phillips, Carey
- Keywords
- none
- MeSH Terms
-
- Animals
- Computational Biology/methods*
- Computer Communication Networks*
- Videodisc Recording*
- Zebrafish/genetics*
- PubMed
- 15602926 Full text @ The Zebrafish: Genetics, Genomics and Informatics, 2nd ed., Methods Cell Biol.
Citation
Cooper, M.S., Sommers-Herivel, G., Poage, C.T., McCarthy, M.B., Crawford, B.D., and Phillips, C. (2004) The Zebrafish DVD Exchange Project: a bioinformatics initiative. The Zebrafish: Genetics, Genomics and Informatics, 2nd ed., Methods Cell Biol.. 77:439-457.
Abstract
Scientists who study zebrafish currently have an acute need to increase the rate of visual data exchange within their international community. Although the Internet has provided a revolutionary transformation of information exchange, the Internet is at present unable to serve as a vehicle for the efficient exchange of massive amounts of visual information. Much like an overburdened public water system, the Internet has inherent limits to the services it can provide. It is possible, however, for zebrafishologists to develop and use virtual intranets (such as the approach we outlined in this chapter) to adapt to the growing informatics need of our expanding research community. We need to assess qualitatively the economics of visual bioinformatics in our research community and evaluate the benefit:investment ratio of our collective information-sharing activities. The development of the World Wide Web started in the early 1990s by particle physicists who needed to rapidly exchange visual information within their collaborations. However, because of current limitations in information bandwidth, the World Wide Web cannot be used to easily exchange gigabytes of visual information. The Zebrafish DVD Exchange Project is aimed at by-passing these limitations. Scientists are curiosity-driven tool makers as well as curiosity-driven tool users. We have the capacity to assimilate new tools, as well as to develop new innovations, to serve our collective research needs. As a proactive research community, we need to create new data transfer methodologies (e.g., the Zebrafish DVD Exchange Project) to stay ahead of our bioinformatics needs.
Genes / Markers
Expression
Phenotype
Mutations / Transgenics
Human Disease / Model
Sequence Targeting Reagents
Fish
Orthology
Engineered Foreign Genes
Mapping