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Figure 4.

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ZDB-IMAGE-210512-31
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Figures for Zhang et al., 2021
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Figure 4.

Analysis of mitochondrial tRNA conformation. (A) Northern blot analysis of tRNAs under native condition. Five micrograms of total RNAs from mutant and WT zebrafish were electrophoresed through a native polyacrylamide gel, electroblotted and hybridized with the DIG-labeled oligonucleotide probes as tRNAGln, tRNATrp, tRNALeu(UUR), tRNALys and tRNAAla, respectively. (B) S1 digestion patterns of tRNAGln, tRNATrp, tRNALeu(UUR), tRNALys and tRNAAla. Two micrograms of RNAs from mto1−/− and WT zebrafish were used for the S1 cleavage reaction at various lengths (from 0 to 120 min). Cleavage products of tRNAs were resolved in 10% denaturating PAGE gels with 8 M urea, electroblotted and hybridized with 3′ end DIG-labeled oligonucleotide probes specific for tRNAGln, tRNATrp, tRNALeu(UUR), tRNALys and tRNAAla, respectively. Arrows denoted the 30–40 nt regions showing 3′ tRNA half.

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