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General Information
ZIRC
ZFIN ID: ZDB-GENE-991109-25
Gene Name: opsin 1 (cone pigments), short-wave-sensitive 1
Gene Symbol: opn1sw1
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: SWS1 (1), uvops, zfuv

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have G protein-coupled photoreceptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway; cellular response to light stimulus; and phototransduction.  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE
Data: Fig. 9 from Yoshimatsu et al., 2014
Observed in:
DISEASE ASSOCIATED WITH opn1sw1 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
blue color blindness Colorblindness, tritan 190900
DISEASE ASSOCIATED WITH opn1sw1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process G protein-coupled receptor signaling pathway (more)
Cellular Component integral component of membrane (more)
Molecular Function G protein-coupled receptor activity (more)
GO Terms (all 14)
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA opn1sw1-201 (1) 1777
GENE PRODUCT DESCRIPTION
INTERACTIONS AND PATHWAYS
ANTIBODIES
PLASMIDS No data available
MARKER RELATIONSHIPS
opn1sw1 Contained in: [BAC] CH211-266A5 (1) (order this)
opn1sw1 Encodes: [cDNA] MGC:73050 (1) (order this), MGC:85903 (1) (order this), MGC:173963 (1) (order this)
opn1sw1 Has Artifact: [cDNA] MGC:103666 (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_131319 (1) 1779 bp
Genomic GenBank:BX465210 (1) 171708 bp
Select Tool
Polypeptide UniProtKB:Q6NW86 (1) 336 aa
Sequence Clusters UniGene:8194 (1)
Sequence Information (all 30)
ORTHOLOGY for opn1sw1 ( Chr: 4 )
CITATIONS (120)