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ZIRC
ZFIN ID: ZDB-GENE-990715-6
Gene Name: SRY-box transcription factor 21a
Gene Symbol: sox21a
Sequence Ontology ID : SO:0000704

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Previous Names: sox21, sox30

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits DNA binding activity and DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in dorsal/ventral pattern formation; negative regulation of transcription by RNA  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa10235 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sox21a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sox21a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process negative regulation of transcription by RNA polymerase II (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 11)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ottdart00000001494 (1) 1071
    sox21a-201 (1) 1129
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sox21a No data available
    MARKER RELATIONSHIPS
    sox21aContained in: [BAC] CH211-241A17 (1) (order this)
    [PAC] BUSM1-202L16 (1) (order this)
    sox21aEncodes: [EST] eu838 (1)
    [cDNA] MGC:65763 (1) (order this), MGC:76855 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131286 (1) 1098bp
    Genomic GenBank:AL953886 (1) 154152bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4I9C0 (1) 239aa
    Sequence Clusters UniGene:132865 (1)
    Sequence Information (all 23)
    ORTHOLOGY for sox21a (Chr: 6)
    CITATIONS (39)