Gene

sema3d

ID
ZDB-GENE-990715-2
Name
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
Symbol
sema3d Nomenclature History
Previous Names
  • sema2
  • sema3D (1)
  • semaZ2 (1)
Type
protein_coding_gene
Location
Chr: 18 Mapping Details/Browsers
Description
Exhibits neuropilin binding activity. Involved in several processes, including animal organ development; fin regeneration; and nervous system development. Predicted to localize to extracellular space and integral component of plasma membrane. Is expressed in several structures, including central nervous system; hindbrain neural keel; neural crest; notochord; and posterior lateral line system. Orthologous to human SEMA3D (semaphorin 3D).
Genome Resources
Note
None
Expression
All Expression Data
47 figures from 22 publications
Cross-Species Comparison
High Throughput Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
10 figures from 5 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With sema3d Human Ortholog
No data available
Associated With sema3d Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001627 Sema domain
Domain IPR016201 PSI domain
Domain IPR042582 Semaphorin-3D, Sema domain
Family IPR027231 Semaphorin
Homologous_superfamily IPR013783 Immunoglobulin-like fold
Homologous_superfamily IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Homologous_superfamily IPR036179 Immunoglobulin-like domain superfamily
Homologous_superfamily IPR036352 Sema domain superfamily
Domain Details Per Protein
Protein Length Immunoglobulin-like domain superfamily Immunoglobulin-like fold PSI domain Sema domain Sema domain superfamily Semaphorin Semaphorin-3D, Sema domain WD40/YVTN repeat-like-containing domain superfamily
UniProtKB:Q9W6G6 764
UniProtKB:A0A0B5JFC0 764
UniProtKB:E9QD84 764
UniProtKB:B3DGT3 764
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-sema3d polyclonal Rabbit
  • IHC
Sigma-Aldrich
3
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Ensembl Gene Tree
Citations