ZFIN ID: ZDB-GENE-990630-12
Gene Name: contactin 2
Gene Symbol: cntn2    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: si:dz37k09.2, tag1, transiently expressed axonal glycoprotein

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 11 Mapping Details/Browsers
Description: Involved in nervous system development. Is expressed in cardiovascular system; nervous system; and trigeminal placode. Human ortholog(s) of this gene implicated in familial adult myoclonic epilepsy 5. Orthologous to human CNTN2 (contactin 2).
Genome Resources: Alliance (1),  Gene:30726 (1),  Ensembl(GRCz11):ENSDARG00000000472 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa9412 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12173 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19006 Point Mutation Unknown Premature Stop ENU
    sa21903 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35078 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41829 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41830 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41831 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • zou20 Indel Exon 4 Premature Stop CRISPR
    zou22 Small Deletion Exon 4 Unknown CRISPR
    Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-cntn2
    2
    CRISPR2-cntn2 1
    MO1-cntn2 N/A 5
    MO2-cntn2 N/A 1
    MO3-cntn2 N/A 1
    DISEASE ASSOCIATED WITH cntn2 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    familial adult myoclonic epilepsy 5 Alliance ?Epilepsy, myoclonic, familial adult, 5 615400
    DISEASE ASSOCIATED WITH cntn2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process neuron migration (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cntn2-201 (1)    Ensembl 2781
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    Name Type Isotype Host Organism Assay Source Publications
    Ab1-cntn2 monoclonal Mouse IHC, WB 7
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cntn2 No data available
    MARKER RELATIONSHIPS
    cntn2 Contained in: [BAC] CH73-73I11 (1)
    [PAC] BUSM1-37K09 (1)
    cntn2 Encodes: [cDNA] cssl:d826 (1), MGC:193851 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_131446 (1) 3980 nt
    Genomic GenBank:AL645810 (1) 86708 nt
    Select Tool
    Polypeptide UniProtKB:A0A2R8QA12 (1) 1040 aa
    Sequence Information (all 29)
    ORTHOLOGY for cntn2 ( Chr: 11 )
    CITATIONS (53)