ZFIN ID: ZDB-GENE-990630-12
Gene Name: contactin 2
Gene Symbol: cntn2
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: si:dz37k09.2, tag1, transiently expressed axonal glycoprotein

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 29 figures from 18 publications
Directly Submitted Expression Data: 7 figures (21 images) from Thisse et al., 2008 [cssl:d826]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Adult (90d-730d, breeding adult)
  anterior lateral line ganglion, anterior lateral line ganglion neuron, brain, cardiovascular system (all 37) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa9412 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12173 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19006 Point Mutation Unknown Premature Stop ENU
    sa21903 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35078 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41829 Point Mutation Unknown Premature Stop ENU
    sa41830 Point Mutation Unknown Premature Stop ENU
    sa41831 Point Mutation Unknown Premature Stop ENU
    Targeting reagents: CRISPR1-cntn2 (2), MO1-cntn2 (1), MO2-cntn2 (1), MO3-cntn2 (1)
    PHENOTYPE
    Data: 9 figures from 2 publications
    Observed in: axon guidance, axonogenesis, facial nerve motor nucleus motor neuron, medial longitudinal fasciculus (all 6) expand
    DISEASE ASSOCIATED WITH cntn2 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    ?Epilepsy, myoclonic, familial adult, 5 615400
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process neuron migration (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003598 (1)
  • InterPro:IPR003599 (1)
  • InterPro:IPR003961 (1)
  • InterPro:IPR007110 (1)
  • InterPro:IPR013098 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR032991 (1)
  • InterPro:IPR036116 (1)
  • InterPro:IPR036179 (1)
  • PROSITE:PS50835 (1)
  • PROSITE:PS50853 (1)
  • Pfam:PF00041 (1)
  • Pfam:PF07679 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cntn2-001 (1) 2781
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    Ab1-cntn2 (1)
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cntn2 No data available
    MARKER RELATIONSHIPS
    cntn2Contained in: [BAC] CH73-73I11 (1) (order this)
    [PAC] BUSM1-37K09 (1) (order this)
    cntn2Encodes: [cDNA] cssl:d826 (1) (order this), MGC:193851 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131446 (1) 3980bp
    Genomic GenBank:AL645810 (1) 86708bp
    Select Tool
    Polypeptide UniProtKB:B3DH04 (1) 1040aa
    Sequence Clusters UniGene:8147 (1)
    Sequence Information (all 28)
    OTHER cntn2 GENE PAGES
  • Alliance (1)
  • Gene:30726 (1)
  • VEGA:OTTDARG00000042389 (1)
  • Ensembl(GRCz10):ENSDARG00000000472 (1)
  • ORTHOLOGY for cntn2 (Chr: 11)
    CITATIONS (49)