ZFIN ID: ZDB-GENE-990415-31
Gene Name: neural cell adhesion molecule 1a
Gene Symbol: ncam1a    Nomenclature History

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Previous Names: ncam1, ncam, zNCAM (1), fj56g09, wu:fj56g09 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 21 Mapping Details/Browsers
Description: Involved in posterior commissure morphogenesis. Predicted to localize to sarcomere. Is expressed in several structures, including anterior neural keel; myotome; nervous system; optic vesicle; and pectoral fin. Human ortholog(s) of this gene implicated in bipolar disorder and pancreatic cancer. Orthologous to human NCAM1 (neural cell adhesion molecule 1).
Genome Resources: Alliance (1),  Gene:30447 (1),  Ensembl(GRCz11):ENSDARG00000056181 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la014026Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la021897Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa1470 Point Mutation Unknown Premature Stop ENU
    sa17923 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23936 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37307 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-ncam1a
    1
    CRISPR2-ncam1a
    1
    MO1-ncam1a N/A 1
    MO2-ncam1a N/A 1
    DISEASE ASSOCIATED WITH ncam1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ncam1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process posterior commissure morphogenesis (more)
    Cellular Component integral component of membrane (more)
    Molecular Function protein binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ncam1a-201 (1)    Ensembl 2921
    ncam1a-202 (1)    Ensembl 878
    ncRNA ncam1a-002 (1) 903
    ncam1a-004 (1) 665
    ncam1a-005 (1) 528
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ncam1a No data available
    MARKER RELATIONSHIPS
    ncam1a Contained in: [BAC] CH211-112C20 (1), CH211-158E11 (1), CH211-286C23 (1), DKEY-65K19 (1) (order this)
    ncam1a Encodes: [EST] eu303 (1), fj56g09 (1)
    [cDNA] cssl:d828 (1), MGC:194084 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_131202 (1) 2726 nt
    Genomic GenBank:BX005227 (1) 187709 nt
    Select Tool
    Polypeptide UniProtKB:A0A0R4IAW3 (1) 898 aa
    Sequence Information (all 60)
    ORTHOLOGY for ncam1a ( Chr: 21 )
    CITATIONS (50)