ZFIN ID: ZDB-GENE-990415-216
Gene Name: proteasome subunit beta 6
Gene Symbol: psmb6
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: beta1 (1), proteasome subunit Y, y, zgc:109823

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(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:109823]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa15051 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37796 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH psmb6 HUMAN ORTHOLOG No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process proteolysis (more)
    Cellular Component cytoplasm (more)
    Molecular Function endopeptidase activity (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000243 (1)
  • InterPro:IPR001353 (1)
  • InterPro:IPR016050 (1)
  • InterPro:IPR023333 (1)
  • InterPro:IPR029055 (1)
  • InterPro:IPR035140 (1)
  • PROSITE:PS00854 (1)
  • PROSITE:PS51476 (1)
  • Pfam:PF00227 (1)
  • EC:3.4.25.1 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA psmb6-001 (1) 1259
    psmb6-002 (1) 459
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM psmb6 No data available
    MARKER RELATIONSHIPS
    psmb6Contained in: [BAC] CH73-160P18 (1) (order this), CH73-375G18 (1) (order this)
    psmb6Encodes: [cDNA] MGC:109823 (1) (order this), MGC:192237 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131152 (1) 672bp
    Genomic GenBank:CU929143 (1) 58959bp
    Select Tool
    Polypeptide UniProtKB:F1RCM3 (1) 232aa
    Sequence Clusters UniGene:11843 (1)
    Sequence Information (all 20)
    OTHER psmb6 GENE PAGES
  • Alliance (1)
  • Gene:30388 (1)
  • VEGA:OTTDARG00000032746 (1)
  • Ensembl(GRCz11):ENSDARG00000002240 (1)
  • ORTHOLOGY for psmb6 (Chr: 23)
    CITATIONS (27)