Gene

arxa

ID
ZDB-GENE-990415-15
Name
aristaless related homeobox a
Symbol
arxa Nomenclature History
Previous Names
  • arx
  • etID309855.24 (1)
  • phox2a
Type
protein_coding_gene
Location
Chr: 24 Mapping Details/Browsers
Description
Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in forebrain development; neuron development; and pancreatic A cell development. Predicted to localize to nuclear chromatin. Is expressed in several structures, including endocrine system; floor plate; forebrain; forebrain neural keel; and neural plate. Human ortholog(s) of this gene implicated in Partington syndrome; early infantile epileptic encephalopathy 1; lissencephaly; non-syndromic X-linked intellectual disability; and syndromic X-linked intellectual disability Hedera type. Orthologous to human ARX (aristaless related homeobox).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
52 figures from 28 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
8 figures from 4 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With arxa Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Developmental and epileptic encephalopathy 1 308350
Hydranencephaly with abnormal genitalia 300215
Intellectual developmental disorder, X-linked 29 300419
Lissencephaly, X-linked 2 300215
Partington syndrome 309510
Proud syndrome 300004
Associated With arxa Via Experimental Models
Human Disease Fish Conditions Citations
epilepsy arxas3005/s3005 standard conditions Griffin et al., 2021
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017970 Homeobox, conserved site
Domain IPR003654 OAR domain
Domain Details Per Protein
Protein Length Homeobox, conserved site OAR domain
UniProtKB:B3DKI9 453
UniProtKB:O42115 453
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA arxa-201 (1) Havana 1522 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations