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General Information
ZIRC
ZFIN ID: ZDB-GENE-990415-135
Gene Name: LIM-domain binding 1b
Gene Symbol: ldb1b
Sequence Ontology ID : SO:0001217

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Previous Name: ldb1 (1)

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have LIM domain binding activity and transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to localize to the  ...
GENE EXPRESSION
All Expression Data: Fig. 3 from Toyama et al., 1998
Wild-type Stages, Structures: Gastrula:Shield (6.0h-8.0h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ldb1b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH ldb1b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of transcription by RNA polymerase II (more)
Cellular Component nucleus (more)
Molecular Function LIM domain binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR029005 (1)
  • InterPro:IPR030167 (1)
  • InterPro:IPR041363 (1)
  • Pfam:PF01803 (1)
  • Pfam:PF17916 (1)
  • TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ldb1b No data available
    MARKER RELATIONSHIPS
    ldb1b Encodes: [cDNA] MGC:123160 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131313 (1) 2133 bp
    Polypeptide UniProtKB:Q2YDQ6 (1) 374 aa
    Sequence Clusters UniGene:156522 (1)
    Sequence Information (all 21)
    OTHER ldb1b GENE PAGES
  • Alliance (1)
  • Gene:30576 (1)
  • Ensembl(GRCz11):ENSDARG00000103158 (1)
  • ORTHOLOGY for ldb1b ( Chr: 11 )
    CITATIONS (13)