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General Information
ZIRC
ZFIN ID: ZDB-GENE-990415-120
Gene Name: homeobox D3a
Gene Symbol: hoxd3a
Sequence Ontology ID : SO:0001217

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Previous Names: hoxd3, im:7144208 (1), Z-56

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity and RNA polymerase II proximal promoter sequence-specific DNA binding activity. Predicted to be involved in anterior/posterior pattern  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la026776Tg Transgenic Insertion Unknown Unknown DNA
la026777Tg Transgenic Insertion Unknown Unknown DNA
la026778Tg Transgenic Insertion Unknown Unknown DNA
la029548Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la029549Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21417 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38720 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hoxd3a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH hoxd3a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process multicellular organism development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 10)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA hoxd3a-002 (1) 480
    mRNA hoxd3a-203 (1) 1970
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM hoxd3a No data available
    MARKER RELATIONSHIPS
    hoxd3a Contained in: [BAC] RP71-78H1 (1) (order this)
    hoxd3a Encodes: [EST] IMAGE:7144208 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131125 (1) 1825 bp
    Genomic GenBank:BX322661 (1) 146527 bp
    Select Tool
    Polypeptide UniProtKB:O42370 (1) 396 aa
    Sequence Clusters UniGene:154862 (1)
    Sequence Information (all 17)
    ORTHOLOGY for hoxd3a ( Chr: 9 )
    CITATIONS (51)