header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-990415-116
Gene Name: homeobox D10a
Gene Symbol: hoxd10a    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: hoxd-10, hoxd10, z-82

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 9 Mapping Details/Browsers
Description: Predicted to have sequence-specific DNA binding activity. Predicted to be involved in multicellular organism development and regulation of transcription, DNA-templated. Predicted to localize to the nucleus. Is expressed in mesenchyme; mesenchyme pectoral fin; pectoral fin bud; and pectoral fin field. Orthologous to human HOXD10 (homeobox D10).
Genome Resources: Alliance (1),  Gene:30404 (1),  Ensembl(GRCz11):ENSDARG00000057859 (2)
GENE EXPRESSION
All Expression Data: 6 figures from 5 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13761 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21418 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-hoxd10a N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hoxd10a HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Charcot-Marie-Tooth disease, foot deformity of 192950
    Vertical talus, congenital 192950
    DISEASE ASSOCIATED WITH hoxd10a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process multicellular organism development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 5)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA hoxd10a-201 (1)    Ensembl 1650
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM hoxd10a No data available
    MARKER RELATIONSHIPS
    hoxd10a Contained in: [BAC] RP71-78H1 (1) (order this)
    hoxd10a Encodes: [cDNA] MGC:86636 (1) (order this), MGC:174768 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131166 (1) 1032 bp
    Genomic GenBank:BX322661 (1) 146527 bp
    Select Tool
    Polypeptide UniProtKB:Q90469 (1) 332 aa
    Sequence Clusters UniGene:75795 (1)
    Sequence Information (all 30)
    ORTHOLOGY for hoxd10a ( Chr: 9 )
    CITATIONS (42)