Gene
sox11b
- ID
- ZDB-GENE-980526-466
- Name
- SRY-box transcription factor 11b
- Symbol
- sox11b Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 20 Mapping Details/Browsers
- Description
- Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific. Involved in several processes, including camera-type eye development; negative regulation of smoothened signaling pathway; and regulation of sprouting angiogenesis. Predicted to localize to nucleus and transcription regulator complex. Is expressed in several structures, including axis; gonad; hindbrain neural keel; nervous system; and somite. Human ortholog(s) of this gene implicated in autosomal dominant non-syndromic intellectual disability 27. Orthologous to human SOX11 (SRY-box transcription factor 11).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 21 figures from 11 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Coffin-Siris syndrome 9 | Alliance | Intellectual developmental disorder with microcephaly and with or without ocular malformations or hypogonadotropic hypogonadism | 615866 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | High mobility group box domain | High mobility group box domain superfamily | Transcription factor SOX-11 | Transcription factor SOX-12/11/4 |
|---|---|---|---|---|---|
|
UniProtKB:Q9I9C7
|
368 | ||||
|
UniProtKB:Q5TZG4
|
368 | ||||
|
UniProtKB:Q9YH22
|
368 | ||||
|
UniProtKB:Q7ZU05
|
47 |
| Type | Name | Length (nt) | Analysis |
|---|---|---|---|
| mRNA |
sox11b-201
(1)
|
2699 nt |
Interactions and Pathways
No data available
Plasmids
No data available