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General Information
ZIRC
ZFIN ID: ZDB-GENE-980526-404
Gene Name: forkhead box A2
Gene Symbol: foxa2
Sequence Ontology ID : SO:0000704

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Previous Names: ax, axl, axial (1), etID309811.17 (1), fkd1 (1), HNF-3B, hnf3b, ik:tdsubc_2g8, mol, monorail, tdsubc_2g8, wu:fe05g04 (1), xx:tdsubc_2g8

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(Including Attributions)
Location: Chr: 17 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits transcription regulatory region sequence-specific DNA binding activity; involved in several processes, including axial mesoderm morphogenesis, endoderm development, and nervous system  ...
GENE EXPRESSION
All Expression Data: 145 figures from 114 publications
Wild-type Stages, Structures: Blastula:30%-epiboly (4.66h-5.25h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
st20 Point Mutation Unknown Unknown ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • tv53a Point Mutation Unknown Unknown ENU
    Targeting reagents:
    DISEASE ASSOCIATED WITH foxa2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH foxa2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process axial mesoderm morphogenesis (more)
    Cellular Component nucleus (more)
    Molecular Function sequence-specific DNA binding (more)
    GO Terms (all 16)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA foxa2-201 (1) 1772
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM foxa2
    MARKER RELATIONSHIPS
    foxa2Contained in: [BAC] DKEY-208C12 (1) (order this)
    foxa2Encodes: [EST] fe05g04 (1), tdsubc_2g8
    [cDNA] MGC:101552 (1) (order this), MGC:192923 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_130949 (1) 1713bp
    Genomic GenBank:CR628331 (1) 92644bp
    Select Tool
    Polypeptide UniProtKB:F1Q819 (1) 409aa
    Sequence Clusters UniGene:483 (1)
    Sequence Information (all 21)
    ORTHOLOGY for foxa2 (Chr: 17)
    CITATIONS (254)