ZFIN ID: ZDB-GENE-980526-242
Gene Name: protocadherin 8
Gene Symbol: pcdh8
Sequence Ontology ID : SO:0000704

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Previous Names: papc (1), paraxial protocadherin (1), sb:eu375, zPAPC

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 89 figures from 69 publications
Directly Submitted Expression Data: 7 figures (17 images) from Thisse et al., 2005 [eu375]
Wild-type Stages, Structures: Blastula:30%-epiboly (4.66h-5.25h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
  adaxial cell, axial mesoderm, caudal fin, epiblast (all 22) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa21612 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents: MO1-pcdh8 (1), MO2-pcdh8 (1)
    PHENOTYPE
    Data: Fig. 1 from Skouloudaki et al., 2009
    Observed in: pronephros
    DISEASE ASSOCIATED WITH pcdh8 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell adhesion (more)
    Cellular Component integral component of membrane (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002126 (1)
  • InterPro:IPR013164 (1)
  • InterPro:IPR015919 (1)
  • InterPro:IPR020894 (1)
  • PROSITE:PS00232 (1)
  • Pfam:PF00028 (1)
  • Pfam:PF08266 (1)
  • TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM pcdh8 No data available
    MARKER RELATIONSHIPS
    pcdh8Contains: [SNP] rs3728249 (1), rs3728250 (1)
    pcdh8Encodes: [EST] eu375 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131209 (1) 3137bp
    Genomic GenBank:CABZ01084081 (1) 42301bp
    Select Tool
    Polypeptide UniProtKB:F1REQ8 (1) 950aa
    Sequence Clusters UniGene:75833 (1)
    Sequence Information (all 11)
    OTHER pcdh8 GENE PAGES
  • Alliance (1)
  • Gene:30456 (1)
  • Ensembl(GRCz10):ENSDARG00000006467 (1)
  • ORTHOLOGY for pcdh8 (Chr: 9)
    CITATIONS (130)