ZFIN ID: ZDB-GENE-980526-111
Gene Name: ependymin
Gene Symbol: epd
Sequence Ontology ID : SO:0000704

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Previous Names: epn, etID309817.5 (1), fj34b05, wu:fj34b05 (1), zgc:109854

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 8 figures from 2 publications
Directly Submitted Expression Data: 7 figures (3 images) from Thisse et al., 2004 [MGC:109854]
Wild-type Stages, Structures: Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH epd HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH epd VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cell-matrix adhesion (more)
Cellular Component extracellular region (more)
Molecular Function calcium ion binding (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001299 (1)
  • InterPro:IPR018224 (1)
  • PROSITE:PS00898 (1)
  • PROSITE:PS00899 (1)
  • Pfam:PF00811 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA epd-001 (1) 890
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM epd No data available
    MARKER RELATIONSHIPS
    epdContained in: [BAC] CH211-69I14 (1) (order this), CH211-139A5 (1) (order this)
    epdEncodes: [EST] fj34b05 (1)
    [cDNA] MGC:109854 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131005 (1) 966bp
    Genomic GenBank:AL935065 (1) 167740bp
    Select Tool
    Polypeptide UniProtKB:P17561 (1) 217aa
    Sequence Clusters UniGene:268 (1)
    Sequence Information (all 19)
    OTHER epd GENE PAGES
  • Alliance (1)
  • Gene:30199 (1)
  • VEGA:OTTDARG00000042793 (1)
  • ORTHOLOGY for epd (Chr: 5)
    CITATIONS (33)