ZFIN ID: ZDB-GENE-980526-111
Gene Name: ependymin
Gene Symbol: epd    Nomenclature History

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Previous Names: epn, etID309817.5 (1), fj34b05, wu:fj34b05 (1), zgc:109854

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity. Predicted to be involved in cell-matrix adhesion. Predicted to localize to lysosome. Is expressed in brain and chondrocranium.
Genome Resources: Alliance (1),  Gene:30199 (1),  Ensembl(GRCz11):ENSDARG00000103498 (1)
GENE EXPRESSION
All Expression Data: 8 figures from 2 publications
Directly Submitted Expression Data: 7 figures (3 images) from Thisse et al., 2004 [MGC:109854]
Wild-type Stages, Structures: Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH epd HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH epd VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cell-matrix adhesion (more)
Cellular Component extracellular region (more)
Molecular Function calcium ion binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA epd-201 (1)    Ensembl 890
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM epd No data available
MARKER RELATIONSHIPS
epd Contained in: [BAC] CH211-69I14 (1), CH211-139A5 (1)
epd Encodes: [EST] fj34b05 (1)
[cDNA] MGC:109854 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_131005 (1) 966 nt
Genomic GenBank:AL935065 (1) 167740 nt
Select Tool
Polypeptide UniProtKB:P17561 (1) 217 aa
Sequence Information (all 18)
ORTHOLOGY for epd ( Chr: 5 )
CITATIONS (38)