ZFIN ID: ZDB-GENE-141215-26
Gene Name: si:dkey-219e21.2
Gene Symbol: si:dkey-219e21.2    Nomenclature History

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Previous Name: si:ch211-222b21.3

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 12 Mapping Details/Browsers
Description: Predicted to have ubiquitin protein ligase activity. Predicted to be involved in protein ubiquitination. Predicted to localize to cytoplasm. Orthologous to human RNF39 (ring finger protein 39).
Genome Resources: Alliance (1),  Gene:797371 (1),  Ensembl(GRCz11):ENSDARG00000096739 (1)

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH si:dkey-219e21.2 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH si:dkey-219e21.2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process protein ubiquitination (more)
Cellular Component cytoplasm (more)
Molecular Function ubiquitin protein ligase activity (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA si:dkey-219e21.2-201 (1)    Ensembl 1926
Browsers: NCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM si:dkey-219e21.2 No data available
MARKER RELATIONSHIPS
si:dkey-219e21.2 Contained in: [BAC] CH211-222B21 (1), DKEY-219E21 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:XM_001337807 (1) 2067 nt
Genomic GenBank:CR848021 (1) 162146 nt
Select Tool
Polypeptide UniProtKB:U3JAZ2 (1) 443 aa
Sequence Information (all 12)
ORTHOLOGY for si:dkey-219e21.2 ( Chr: 12 )
CITATIONS (8)